Gene : ARP9 A. thaliana TAIR10
Primary Identifier:  ? AT5G43500 Defline:  (1 of 1) K11673 - actin-related protein 8 (ACTR8, ARP8, INO80N)
Genomic Order:  3697 Name:  ? AT5G43500
Secondary Identifier:  ? PAC:19668604
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G43500 0.5kb upstream 0.5kb upstream 4417 true Chr5: 17469175-17473591 Arabidopsis thaliana
AT5G43500 0.5kb upstream 0.5kb upstream 500 false Chr5: 17469175-17469674 Arabidopsis thaliana
AT5G43500 0.5kb downstream 0.5kb downstream 4417 true Chr5: 17469675-17474091 Arabidopsis thaliana
AT5G43500 0.5kb downstream 0.5kb downstream 500 false Chr5: 17473592-17474091 Arabidopsis thaliana
AT5G43500 1.0kb upstream 1.0kb upstream 4917 true Chr5: 17468675-17473591 Arabidopsis thaliana
AT5G43500 1.0kb upstream 1.0kb upstream 1000 false Chr5: 17468675-17469674 Arabidopsis thaliana
AT5G43500 1.0kb downstream 1.0kb downstream 4917 true Chr5: 17469675-17474591 Arabidopsis thaliana
AT5G43500 1.0kb downstream 1.0kb downstream 1000 false Chr5: 17473592-17474591 Arabidopsis thaliana
AT5G43500 2.0kb upstream 2.0kb upstream 5917 true Chr5: 17467675-17473591 Arabidopsis thaliana
AT5G43500 2.0kb upstream 2.0kb upstream 2000 false Chr5: 17467675-17469674 Arabidopsis thaliana
AT5G43500 2.0kb downstream 2.0kb downstream 5917 true Chr5: 17469675-17475591 Arabidopsis thaliana
AT5G43500 2.0kb downstream 2.0kb downstream 2000 false Chr5: 17473592-17475591 Arabidopsis thaliana
AT5G43500 5.0kb upstream 5.0kb upstream 8917 true Chr5: 17464675-17473591 Arabidopsis thaliana
AT5G43500 5.0kb upstream 5.0kb upstream 5000 false Chr5: 17464675-17469674 Arabidopsis thaliana
AT5G43500 5.0kb downstream 5.0kb downstream 8917 true Chr5: 17469675-17478591 Arabidopsis thaliana
AT5G43500 5.0kb downstream 5.0kb downstream 5000 false Chr5: 17473592-17478591 Arabidopsis thaliana
AT5G43500 10.0kb upstream 10.0kb upstream 13917 true Chr5: 17459675-17473591 Arabidopsis thaliana
AT5G43500 10.0kb upstream 10.0kb upstream 10000 false Chr5: 17459675-17469674 Arabidopsis thaliana
AT5G43500 10.0kb downstream 10.0kb downstream 13917 true Chr5: 17469675-17483591 Arabidopsis thaliana
AT5G43500 10.0kb downstream 10.0kb downstream 10000 false Chr5: 17473592-17483591 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122368612 5261 Brassicaceae View MSA
123833474 5264 Brassicales-Malvales View MSA
124340160 5266 SBM View MSA
124238905 5268 Malvidae View MSA
124064875 5270 Rosid View MSA
123740478 5271 Pentapetalae View MSA
122793268 5272 Eudicot View MSA
122046420 5273 Angiosperm View MSA
121345256 5274 Embryophyte View MSA
123380181 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.332        
cufflinks 2.817       High
cufflinks 2.056        
cufflinks 2.407        
cufflinks 1.862       Low
cufflinks 2.259        

0 Strain