Gene : ckl8 A. thaliana TAIR10
Primary Identifier:  ? AT5G43320 Defline:  (1 of 3) PTHR11909//PTHR11909:SF178 - CASEIN KINASE-RELATED // CASEIN KINASE 1-LIKE PROTEIN 8
Genomic Order:  3678 Name:  ? AT5G43320
Secondary Identifier:  ? PAC:19665807
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G43320 0.5kb upstream 0.5kb upstream 4161 true Chr5: 17385867-17390027 Arabidopsis thaliana
AT5G43320 0.5kb upstream 0.5kb upstream 500 false Chr5: 17389528-17390027 Arabidopsis thaliana
AT5G43320 0.5kb downstream 0.5kb downstream 4161 true Chr5: 17385367-17389527 Arabidopsis thaliana
AT5G43320 0.5kb downstream 0.5kb downstream 500 false Chr5: 17385367-17385866 Arabidopsis thaliana
AT5G43320 1.0kb upstream 1.0kb upstream 4661 true Chr5: 17385867-17390527 Arabidopsis thaliana
AT5G43320 1.0kb upstream 1.0kb upstream 1000 false Chr5: 17389528-17390527 Arabidopsis thaliana
AT5G43320 1.0kb downstream 1.0kb downstream 4661 true Chr5: 17384867-17389527 Arabidopsis thaliana
AT5G43320 1.0kb downstream 1.0kb downstream 1000 false Chr5: 17384867-17385866 Arabidopsis thaliana
AT5G43320 2.0kb upstream 2.0kb upstream 5661 true Chr5: 17385867-17391527 Arabidopsis thaliana
AT5G43320 2.0kb upstream 2.0kb upstream 2000 false Chr5: 17389528-17391527 Arabidopsis thaliana
AT5G43320 2.0kb downstream 2.0kb downstream 5661 true Chr5: 17383867-17389527 Arabidopsis thaliana
AT5G43320 2.0kb downstream 2.0kb downstream 2000 false Chr5: 17383867-17385866 Arabidopsis thaliana
AT5G43320 5.0kb upstream 5.0kb upstream 8661 true Chr5: 17385867-17394527 Arabidopsis thaliana
AT5G43320 5.0kb upstream 5.0kb upstream 5000 false Chr5: 17389528-17394527 Arabidopsis thaliana
AT5G43320 5.0kb downstream 5.0kb downstream 8661 true Chr5: 17380867-17389527 Arabidopsis thaliana
AT5G43320 5.0kb downstream 5.0kb downstream 5000 false Chr5: 17380867-17385866 Arabidopsis thaliana
AT5G43320 10.0kb upstream 10.0kb upstream 13661 true Chr5: 17385867-17399527 Arabidopsis thaliana
AT5G43320 10.0kb upstream 10.0kb upstream 10000 false Chr5: 17389528-17399527 Arabidopsis thaliana
AT5G43320 10.0kb downstream 10.0kb downstream 13661 true Chr5: 17375867-17389527 Arabidopsis thaliana
AT5G43320 10.0kb downstream 10.0kb downstream 10000 false Chr5: 17375867-17385866 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122377795 5261 Brassicaceae View MSA
123801637 5264 Brassicales-Malvales View MSA
124298915 5266 SBM View MSA
124150451 5268 Malvidae View MSA
124074608 5270 Rosid View MSA
123745824 5271 Pentapetalae View MSA
122787812 5272 Eudicot View MSA
122045812 5273 Angiosperm View MSA
121310507 5274 Embryophyte View MSA
123427595 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 47.403     High  
cufflinks 50.082     High  
cufflinks 49.19     High  
cufflinks 49.316     High  
cufflinks 59.203     High High
cufflinks 52.04     High  

0 Strain