Gene : WPP1 A. thaliana TAIR10
Primary Identifier:  ? AT5G43070 Defline:  (1 of 3) PTHR34362//PTHR34362:SF1 - FAMILY NOT NAMED // WPP DOMAIN-CONTAINING PROTEIN 1-RELATED
Genomic Order:  3649 Name:  ? AT5G43070
Secondary Identifier:  ? PAC:19671264
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G43070 0.5kb upstream 0.5kb upstream 1177 true Chr5: 17289100-17290276 Arabidopsis thaliana
AT5G43070 0.5kb upstream 0.5kb upstream 500 false Chr5: 17289777-17290276 Arabidopsis thaliana
AT5G43070 0.5kb downstream 0.5kb downstream 1177 true Chr5: 17288600-17289776 Arabidopsis thaliana
AT5G43070 0.5kb downstream 0.5kb downstream 500 false Chr5: 17288600-17289099 Arabidopsis thaliana
AT5G43070 1.0kb upstream 1.0kb upstream 1677 true Chr5: 17289100-17290776 Arabidopsis thaliana
AT5G43070 1.0kb upstream 1.0kb upstream 1000 false Chr5: 17289777-17290776 Arabidopsis thaliana
AT5G43070 1.0kb downstream 1.0kb downstream 1677 true Chr5: 17288100-17289776 Arabidopsis thaliana
AT5G43070 1.0kb downstream 1.0kb downstream 1000 false Chr5: 17288100-17289099 Arabidopsis thaliana
AT5G43070 2.0kb upstream 2.0kb upstream 2677 true Chr5: 17289100-17291776 Arabidopsis thaliana
AT5G43070 2.0kb upstream 2.0kb upstream 2000 false Chr5: 17289777-17291776 Arabidopsis thaliana
AT5G43070 2.0kb downstream 2.0kb downstream 2677 true Chr5: 17287100-17289776 Arabidopsis thaliana
AT5G43070 2.0kb downstream 2.0kb downstream 2000 false Chr5: 17287100-17289099 Arabidopsis thaliana
AT5G43070 5.0kb upstream 5.0kb upstream 5677 true Chr5: 17289100-17294776 Arabidopsis thaliana
AT5G43070 5.0kb upstream 5.0kb upstream 5000 false Chr5: 17289777-17294776 Arabidopsis thaliana
AT5G43070 5.0kb downstream 5.0kb downstream 5677 true Chr5: 17284100-17289776 Arabidopsis thaliana
AT5G43070 5.0kb downstream 5.0kb downstream 5000 false Chr5: 17284100-17289099 Arabidopsis thaliana
AT5G43070 10.0kb upstream 10.0kb upstream 10677 true Chr5: 17289100-17299776 Arabidopsis thaliana
AT5G43070 10.0kb upstream 10.0kb upstream 10000 false Chr5: 17289777-17299776 Arabidopsis thaliana
AT5G43070 10.0kb downstream 10.0kb downstream 10677 true Chr5: 17279100-17289776 Arabidopsis thaliana
AT5G43070 10.0kb downstream 10.0kb downstream 10000 false Chr5: 17279100-17289099 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122380019 5261 Brassicaceae View MSA
123836389 5264 Brassicales-Malvales View MSA
124343063 5266 SBM View MSA
124242425 5268 Malvidae View MSA
124061872 5270 Rosid View MSA
123739220 5271 Pentapetalae View MSA
122792231 5272 Eudicot View MSA
122045089 5273 Angiosperm View MSA
121310396 5274 Embryophyte View MSA
123347890 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 9.07        
cufflinks 11.209        
cufflinks 7.541        
cufflinks 12.693        
cufflinks 5.548       Low
cufflinks 13.118        

0 Strain