Gene : AT5G43140 A. thaliana TAIR10
Defline:  (1 of 1) PTHR11266//PTHR11266:SF43 - PEROXISOMAL MEMBRANE PROTEIN 2, PXMP2 MPV17 // SUBFAMILY NOT NAMED Genomic Order:  3656
Name:  ? AT5G43140 Secondary Identifier:  ? PAC:19672802
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G43140 0.5kb upstream 0.5kb upstream 2364 true Chr5: 17321045-17323408 Arabidopsis thaliana
AT5G43140 0.5kb upstream 0.5kb upstream 500 false Chr5: 17321045-17321544 Arabidopsis thaliana
AT5G43140 0.5kb downstream 0.5kb downstream 2364 true Chr5: 17321545-17323908 Arabidopsis thaliana
AT5G43140 0.5kb downstream 0.5kb downstream 500 false Chr5: 17323409-17323908 Arabidopsis thaliana
AT5G43140 1.0kb upstream 1.0kb upstream 2864 true Chr5: 17320545-17323408 Arabidopsis thaliana
AT5G43140 1.0kb upstream 1.0kb upstream 1000 false Chr5: 17320545-17321544 Arabidopsis thaliana
AT5G43140 1.0kb downstream 1.0kb downstream 2864 true Chr5: 17321545-17324408 Arabidopsis thaliana
AT5G43140 1.0kb downstream 1.0kb downstream 1000 false Chr5: 17323409-17324408 Arabidopsis thaliana
AT5G43140 2.0kb upstream 2.0kb upstream 3864 true Chr5: 17319545-17323408 Arabidopsis thaliana
AT5G43140 2.0kb upstream 2.0kb upstream 2000 false Chr5: 17319545-17321544 Arabidopsis thaliana
AT5G43140 2.0kb downstream 2.0kb downstream 3864 true Chr5: 17321545-17325408 Arabidopsis thaliana
AT5G43140 2.0kb downstream 2.0kb downstream 2000 false Chr5: 17323409-17325408 Arabidopsis thaliana
AT5G43140 5.0kb upstream 5.0kb upstream 6864 true Chr5: 17316545-17323408 Arabidopsis thaliana
AT5G43140 5.0kb upstream 5.0kb upstream 5000 false Chr5: 17316545-17321544 Arabidopsis thaliana
AT5G43140 5.0kb downstream 5.0kb downstream 6864 true Chr5: 17321545-17328408 Arabidopsis thaliana
AT5G43140 5.0kb downstream 5.0kb downstream 5000 false Chr5: 17323409-17328408 Arabidopsis thaliana
AT5G43140 10.0kb upstream 10.0kb upstream 11864 true Chr5: 17311545-17323408 Arabidopsis thaliana
AT5G43140 10.0kb upstream 10.0kb upstream 10000 false Chr5: 17311545-17321544 Arabidopsis thaliana
AT5G43140 10.0kb downstream 10.0kb downstream 11864 true Chr5: 17321545-17333408 Arabidopsis thaliana
AT5G43140 10.0kb downstream 10.0kb downstream 10000 false Chr5: 17323409-17333408 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122365603 5261 Brassicaceae View MSA
123798992 5264 Brassicales-Malvales View MSA
124347920 5266 SBM View MSA
124244647 5268 Malvidae View MSA
124061576 5270 Rosid View MSA
123751780 5271 Pentapetalae View MSA
122796884 5272 Eudicot View MSA
122051343 5273 Angiosperm View MSA
121350942 5274 Embryophyte View MSA
123428334 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.119       Low
cufflinks 8.63        
cufflinks 7.384        
cufflinks 7.256        
cufflinks 7.652        
cufflinks 8.092        

0 Strain