Gene : DFR A. thaliana TAIR10
Primary Identifier:  ? AT5G42800 Defline:  (1 of 1) K13082 - bifunctional dihydroflavonol 4-reductase/flavanone 4-reductase (DFR)
Genomic Order:  3615 Name:  ? AT5G42800
Secondary Identifier:  ? PAC:19670924
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Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Athaliana PWY1F-823 Arabidopsis thaliana pathologic  
Athaliana PWY-5152 Arabidopsis thaliana pathologic  

Genomics

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Expression

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3 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G42800 0.5kb upstream 0.5kb upstream 2278 true Chr5: 17164141-17166418 Arabidopsis thaliana
AT5G42800 0.5kb upstream 0.5kb upstream 500 false Chr5: 17165919-17166418 Arabidopsis thaliana
AT5G42800 0.5kb downstream 0.5kb downstream 2278 true Chr5: 17163641-17165918 Arabidopsis thaliana
AT5G42800 0.5kb downstream 0.5kb downstream 500 false Chr5: 17163641-17164140 Arabidopsis thaliana
AT5G42800 1.0kb upstream 1.0kb upstream 2778 true Chr5: 17164141-17166918 Arabidopsis thaliana
AT5G42800 1.0kb upstream 1.0kb upstream 1000 false Chr5: 17165919-17166918 Arabidopsis thaliana
AT5G42800 1.0kb downstream 1.0kb downstream 2778 true Chr5: 17163141-17165918 Arabidopsis thaliana
AT5G42800 1.0kb downstream 1.0kb downstream 1000 false Chr5: 17163141-17164140 Arabidopsis thaliana
AT5G42800 2.0kb upstream 2.0kb upstream 3778 true Chr5: 17164141-17167918 Arabidopsis thaliana
AT5G42800 2.0kb upstream 2.0kb upstream 2000 false Chr5: 17165919-17167918 Arabidopsis thaliana
AT5G42800 2.0kb downstream 2.0kb downstream 3778 true Chr5: 17162141-17165918 Arabidopsis thaliana
AT5G42800 2.0kb downstream 2.0kb downstream 2000 false Chr5: 17162141-17164140 Arabidopsis thaliana
AT5G42800 5.0kb upstream 5.0kb upstream 6778 true Chr5: 17164141-17170918 Arabidopsis thaliana
AT5G42800 5.0kb upstream 5.0kb upstream 5000 false Chr5: 17165919-17170918 Arabidopsis thaliana
AT5G42800 5.0kb downstream 5.0kb downstream 6778 true Chr5: 17159141-17165918 Arabidopsis thaliana
AT5G42800 5.0kb downstream 5.0kb downstream 5000 false Chr5: 17159141-17164140 Arabidopsis thaliana
AT5G42800 10.0kb upstream 10.0kb upstream 11778 true Chr5: 17164141-17175918 Arabidopsis thaliana
AT5G42800 10.0kb upstream 10.0kb upstream 10000 false Chr5: 17165919-17175918 Arabidopsis thaliana
AT5G42800 10.0kb downstream 10.0kb downstream 11778 true Chr5: 17154141-17165918 Arabidopsis thaliana
AT5G42800 10.0kb downstream 10.0kb downstream 10000 false Chr5: 17154141-17164140 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122360794 5261 Brassicaceae View MSA
123837544 5264 Brassicales-Malvales View MSA
124342653 5266 SBM View MSA
124242252 5268 Malvidae View MSA
124060476 5270 Rosid View MSA
123737203 5271 Pentapetalae View MSA
122791176 5272 Eudicot View MSA
122042969 5273 Angiosperm View MSA
121310058 5274 Embryophyte View MSA
123428289 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 9.726       High
cufflinks 0.633       Low
cufflinks 1.749        
cufflinks 4.526        
cufflinks 5.735        
cufflinks 0.623       Low

0 Strain