Gene : DOG1 A. thaliana TAIR10
Primary Identifier:  ? AT5G45830 Defline:  (1 of 4) PTHR22952//PTHR22952:SF210 - CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED // DOG1 ALPHA SPLICE VARIANT
Genomic Order:  3960 Name:  ? AT5G45830
Secondary Identifier:  ? PAC:19669924
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

3 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G45830 0.5kb upstream 0.5kb upstream 2419 true Chr5: 18589482-18591900 Arabidopsis thaliana
AT5G45830 0.5kb upstream 0.5kb upstream 500 false Chr5: 18591401-18591900 Arabidopsis thaliana
AT5G45830 0.5kb downstream 0.5kb downstream 2419 true Chr5: 18588982-18591400 Arabidopsis thaliana
AT5G45830 0.5kb downstream 0.5kb downstream 500 false Chr5: 18588982-18589481 Arabidopsis thaliana
AT5G45830 1.0kb upstream 1.0kb upstream 2919 true Chr5: 18589482-18592400 Arabidopsis thaliana
AT5G45830 1.0kb upstream 1.0kb upstream 1000 false Chr5: 18591401-18592400 Arabidopsis thaliana
AT5G45830 1.0kb downstream 1.0kb downstream 2919 true Chr5: 18588482-18591400 Arabidopsis thaliana
AT5G45830 1.0kb downstream 1.0kb downstream 1000 false Chr5: 18588482-18589481 Arabidopsis thaliana
AT5G45830 2.0kb upstream 2.0kb upstream 3919 true Chr5: 18589482-18593400 Arabidopsis thaliana
AT5G45830 2.0kb upstream 2.0kb upstream 2000 false Chr5: 18591401-18593400 Arabidopsis thaliana
AT5G45830 2.0kb downstream 2.0kb downstream 3919 true Chr5: 18587482-18591400 Arabidopsis thaliana
AT5G45830 2.0kb downstream 2.0kb downstream 2000 false Chr5: 18587482-18589481 Arabidopsis thaliana
AT5G45830 5.0kb upstream 5.0kb upstream 6919 true Chr5: 18589482-18596400 Arabidopsis thaliana
AT5G45830 5.0kb upstream 5.0kb upstream 5000 false Chr5: 18591401-18596400 Arabidopsis thaliana
AT5G45830 5.0kb downstream 5.0kb downstream 6919 true Chr5: 18584482-18591400 Arabidopsis thaliana
AT5G45830 5.0kb downstream 5.0kb downstream 5000 false Chr5: 18584482-18589481 Arabidopsis thaliana
AT5G45830 10.0kb upstream 10.0kb upstream 11919 true Chr5: 18589482-18601400 Arabidopsis thaliana
AT5G45830 10.0kb upstream 10.0kb upstream 10000 false Chr5: 18591401-18601400 Arabidopsis thaliana
AT5G45830 10.0kb downstream 10.0kb downstream 11919 true Chr5: 18579482-18591400 Arabidopsis thaliana
AT5G45830 10.0kb downstream 10.0kb downstream 10000 false Chr5: 18579482-18589481 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122364056 5261 Brassicaceae View MSA
123835440 5264 Brassicales-Malvales View MSA
124322052 5266 SBM View MSA
124250601 5268 Malvidae View MSA
124070916 5270 Rosid View MSA
123746178 5271 Pentapetalae View MSA
122797836 5272 Eudicot View MSA
122044806 5273 Angiosperm View MSA
121350176 5274 Embryophyte View MSA
123381607 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.007     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.851        
cufflinks 0.02     Low  
cufflinks 1.938        
cufflinks 0.0     Not Expressed Not Expressed

0 Strain