Gene : AT5G45880 A. thaliana TAIR10
Defline:  (1 of 3) PTHR31614:SF2 - F28N24.16 PROTEIN Genomic Order:  3966
Name:  ? AT5G45880 Secondary Identifier:  ? PAC:19667889
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G45880 0.5kb upstream 0.5kb upstream 2003 true Chr5: 18609664-18611666 Arabidopsis thaliana
AT5G45880 0.5kb upstream 0.5kb upstream 500 false Chr5: 18611167-18611666 Arabidopsis thaliana
AT5G45880 0.5kb downstream 0.5kb downstream 2003 true Chr5: 18609164-18611166 Arabidopsis thaliana
AT5G45880 0.5kb downstream 0.5kb downstream 500 false Chr5: 18609164-18609663 Arabidopsis thaliana
AT5G45880 1.0kb upstream 1.0kb upstream 2503 true Chr5: 18609664-18612166 Arabidopsis thaliana
AT5G45880 1.0kb upstream 1.0kb upstream 1000 false Chr5: 18611167-18612166 Arabidopsis thaliana
AT5G45880 1.0kb downstream 1.0kb downstream 2503 true Chr5: 18608664-18611166 Arabidopsis thaliana
AT5G45880 1.0kb downstream 1.0kb downstream 1000 false Chr5: 18608664-18609663 Arabidopsis thaliana
AT5G45880 2.0kb upstream 2.0kb upstream 3503 true Chr5: 18609664-18613166 Arabidopsis thaliana
AT5G45880 2.0kb upstream 2.0kb upstream 2000 false Chr5: 18611167-18613166 Arabidopsis thaliana
AT5G45880 2.0kb downstream 2.0kb downstream 3503 true Chr5: 18607664-18611166 Arabidopsis thaliana
AT5G45880 2.0kb downstream 2.0kb downstream 2000 false Chr5: 18607664-18609663 Arabidopsis thaliana
AT5G45880 5.0kb upstream 5.0kb upstream 6503 true Chr5: 18609664-18616166 Arabidopsis thaliana
AT5G45880 5.0kb upstream 5.0kb upstream 5000 false Chr5: 18611167-18616166 Arabidopsis thaliana
AT5G45880 5.0kb downstream 5.0kb downstream 6503 true Chr5: 18604664-18611166 Arabidopsis thaliana
AT5G45880 5.0kb downstream 5.0kb downstream 5000 false Chr5: 18604664-18609663 Arabidopsis thaliana
AT5G45880 10.0kb upstream 10.0kb upstream 11503 true Chr5: 18609664-18621166 Arabidopsis thaliana
AT5G45880 10.0kb upstream 10.0kb upstream 10000 false Chr5: 18611167-18621166 Arabidopsis thaliana
AT5G45880 10.0kb downstream 10.0kb downstream 11503 true Chr5: 18599664-18611166 Arabidopsis thaliana
AT5G45880 10.0kb downstream 10.0kb downstream 10000 false Chr5: 18599664-18609663 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122380088 5261 Brassicaceae View MSA
123802551 5264 Brassicales-Malvales View MSA
124299739 5266 SBM View MSA
124151069 5268 Malvidae View MSA
124069142 5270 Rosid View MSA
123747822 5271 Pentapetalae View MSA
122796154 5272 Eudicot View MSA
122045197 5273 Angiosperm View MSA
121310413 5274 Embryophyte View MSA
123347903 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.01     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed

0 Strain