Gene : AT5G45850 A. thaliana TAIR10
Defline:  (1 of 4) PTHR33671//PTHR33671:SF3 - FAMILY NOT NAMED // F28N24.8 PROTEIN Genomic Order:  3962
Name:  ? AT5G45850 Secondary Identifier:  ? PAC:19665798
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G45850 0.5kb upstream 0.5kb upstream 2312 true Chr5: 18599759-18602070 Arabidopsis thaliana
AT5G45850 0.5kb upstream 0.5kb upstream 500 false Chr5: 18601571-18602070 Arabidopsis thaliana
AT5G45850 0.5kb downstream 0.5kb downstream 2312 true Chr5: 18599259-18601570 Arabidopsis thaliana
AT5G45850 0.5kb downstream 0.5kb downstream 500 false Chr5: 18599259-18599758 Arabidopsis thaliana
AT5G45850 1.0kb upstream 1.0kb upstream 2812 true Chr5: 18599759-18602570 Arabidopsis thaliana
AT5G45850 1.0kb upstream 1.0kb upstream 1000 false Chr5: 18601571-18602570 Arabidopsis thaliana
AT5G45850 1.0kb downstream 1.0kb downstream 2812 true Chr5: 18598759-18601570 Arabidopsis thaliana
AT5G45850 1.0kb downstream 1.0kb downstream 1000 false Chr5: 18598759-18599758 Arabidopsis thaliana
AT5G45850 2.0kb upstream 2.0kb upstream 3812 true Chr5: 18599759-18603570 Arabidopsis thaliana
AT5G45850 2.0kb upstream 2.0kb upstream 2000 false Chr5: 18601571-18603570 Arabidopsis thaliana
AT5G45850 2.0kb downstream 2.0kb downstream 3812 true Chr5: 18597759-18601570 Arabidopsis thaliana
AT5G45850 2.0kb downstream 2.0kb downstream 2000 false Chr5: 18597759-18599758 Arabidopsis thaliana
AT5G45850 5.0kb upstream 5.0kb upstream 6812 true Chr5: 18599759-18606570 Arabidopsis thaliana
AT5G45850 5.0kb upstream 5.0kb upstream 5000 false Chr5: 18601571-18606570 Arabidopsis thaliana
AT5G45850 5.0kb downstream 5.0kb downstream 6812 true Chr5: 18594759-18601570 Arabidopsis thaliana
AT5G45850 5.0kb downstream 5.0kb downstream 5000 false Chr5: 18594759-18599758 Arabidopsis thaliana
AT5G45850 10.0kb upstream 10.0kb upstream 11812 true Chr5: 18599759-18611570 Arabidopsis thaliana
AT5G45850 10.0kb upstream 10.0kb upstream 10000 false Chr5: 18601571-18611570 Arabidopsis thaliana
AT5G45850 10.0kb downstream 10.0kb downstream 11812 true Chr5: 18589759-18601570 Arabidopsis thaliana
AT5G45850 10.0kb downstream 10.0kb downstream 10000 false Chr5: 18589759-18599758 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122376611 5261 Brassicaceae View MSA
123801307 5264 Brassicales-Malvales View MSA
124298629 5266 SBM View MSA
124150225 5268 Malvidae View MSA
123875881 5270 Rosid View MSA
123745252 5271 Pentapetalae View MSA
122793682 5272 Eudicot View MSA
122048199 5273 Angiosperm View MSA
121349828 5274 Embryophyte View MSA
123381462 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.896       High
cufflinks 0.176     Low Low
cufflinks 0.408        
cufflinks 0.283     Low  
cufflinks 0.444        
cufflinks 0.235     Low  

0 Strain