Gene : CHLI2 A. thaliana TAIR10
Primary Identifier:  ? AT5G45930 Defline:  (1 of 1) 3.6.1.3//6.6.1.1 - Adenosinetriphosphatase / Triphosphatase // Magnesium chelatase / Protoporphyrin IX Mg-chelatase
Genomic Order:  3971 Name:  ? AT5G45930
Secondary Identifier:  ? PAC:19669369
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Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Athaliana CHLOROPHYLL-SYN Arabidopsis thaliana pathologic  

Genomics

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Expression

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3 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G45930 0.5kb upstream 0.5kb upstream 2191 true Chr5: 18627507-18629697 Arabidopsis thaliana
AT5G45930 0.5kb upstream 0.5kb upstream 500 false Chr5: 18627507-18628006 Arabidopsis thaliana
AT5G45930 0.5kb downstream 0.5kb downstream 2191 true Chr5: 18628007-18630197 Arabidopsis thaliana
AT5G45930 0.5kb downstream 0.5kb downstream 500 false Chr5: 18629698-18630197 Arabidopsis thaliana
AT5G45930 1.0kb upstream 1.0kb upstream 2691 true Chr5: 18627007-18629697 Arabidopsis thaliana
AT5G45930 1.0kb upstream 1.0kb upstream 1000 false Chr5: 18627007-18628006 Arabidopsis thaliana
AT5G45930 1.0kb downstream 1.0kb downstream 2691 true Chr5: 18628007-18630697 Arabidopsis thaliana
AT5G45930 1.0kb downstream 1.0kb downstream 1000 false Chr5: 18629698-18630697 Arabidopsis thaliana
AT5G45930 2.0kb upstream 2.0kb upstream 3691 true Chr5: 18626007-18629697 Arabidopsis thaliana
AT5G45930 2.0kb upstream 2.0kb upstream 2000 false Chr5: 18626007-18628006 Arabidopsis thaliana
AT5G45930 2.0kb downstream 2.0kb downstream 3691 true Chr5: 18628007-18631697 Arabidopsis thaliana
AT5G45930 2.0kb downstream 2.0kb downstream 2000 false Chr5: 18629698-18631697 Arabidopsis thaliana
AT5G45930 5.0kb upstream 5.0kb upstream 6691 true Chr5: 18623007-18629697 Arabidopsis thaliana
AT5G45930 5.0kb upstream 5.0kb upstream 5000 false Chr5: 18623007-18628006 Arabidopsis thaliana
AT5G45930 5.0kb downstream 5.0kb downstream 6691 true Chr5: 18628007-18634697 Arabidopsis thaliana
AT5G45930 5.0kb downstream 5.0kb downstream 5000 false Chr5: 18629698-18634697 Arabidopsis thaliana
AT5G45930 10.0kb upstream 10.0kb upstream 11691 true Chr5: 18618007-18629697 Arabidopsis thaliana
AT5G45930 10.0kb upstream 10.0kb upstream 10000 false Chr5: 18618007-18628006 Arabidopsis thaliana
AT5G45930 10.0kb downstream 10.0kb downstream 11691 true Chr5: 18628007-18639697 Arabidopsis thaliana
AT5G45930 10.0kb downstream 10.0kb downstream 10000 false Chr5: 18629698-18639697 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026298 5273 Angiosperm View MSA
122363978 5261 Brassicaceae View MSA
123838175 5264 Brassicales-Malvales View MSA
124343435 5266 SBM View MSA
124251602 5268 Malvidae View MSA
124063666 5270 Rosid View MSA
123736903 5271 Pentapetalae View MSA
122790961 5272 Eudicot View MSA
121346302 5274 Embryophyte View MSA
123426232 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 50.162     High  
cufflinks 1.295        
cufflinks 68.124     High High
cufflinks 0.869       Low
cufflinks 45.062     High  
cufflinks 1.09        

0 Strain