Gene : AT5G45560 A. thaliana TAIR10
Defline:  (1 of 2) PTHR12136//PTHR12136:SF47 - STEROIDOGENIC ACUTE REGULATORY PROTEIN STAR // STEROIDOGENIC ACUTE REGULATORY-LIKE PROTEIN 1 Genomic Order:  3931
Name:  ? AT5G45560 Secondary Identifier:  ? PAC:19671025
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G45560 0.5kb upstream 0.5kb upstream 6072 true Chr5: 18464855-18470926 Arabidopsis thaliana
AT5G45560 0.5kb upstream 0.5kb upstream 500 false Chr5: 18464855-18465354 Arabidopsis thaliana
AT5G45560 0.5kb downstream 0.5kb downstream 6072 true Chr5: 18465355-18471426 Arabidopsis thaliana
AT5G45560 0.5kb downstream 0.5kb downstream 500 false Chr5: 18470927-18471426 Arabidopsis thaliana
AT5G45560 1.0kb upstream 1.0kb upstream 6572 true Chr5: 18464355-18470926 Arabidopsis thaliana
AT5G45560 1.0kb upstream 1.0kb upstream 1000 false Chr5: 18464355-18465354 Arabidopsis thaliana
AT5G45560 1.0kb downstream 1.0kb downstream 6572 true Chr5: 18465355-18471926 Arabidopsis thaliana
AT5G45560 1.0kb downstream 1.0kb downstream 1000 false Chr5: 18470927-18471926 Arabidopsis thaliana
AT5G45560 2.0kb upstream 2.0kb upstream 7572 true Chr5: 18463355-18470926 Arabidopsis thaliana
AT5G45560 2.0kb upstream 2.0kb upstream 2000 false Chr5: 18463355-18465354 Arabidopsis thaliana
AT5G45560 2.0kb downstream 2.0kb downstream 7572 true Chr5: 18465355-18472926 Arabidopsis thaliana
AT5G45560 2.0kb downstream 2.0kb downstream 2000 false Chr5: 18470927-18472926 Arabidopsis thaliana
AT5G45560 5.0kb upstream 5.0kb upstream 10572 true Chr5: 18460355-18470926 Arabidopsis thaliana
AT5G45560 5.0kb upstream 5.0kb upstream 5000 false Chr5: 18460355-18465354 Arabidopsis thaliana
AT5G45560 5.0kb downstream 5.0kb downstream 10572 true Chr5: 18465355-18475926 Arabidopsis thaliana
AT5G45560 5.0kb downstream 5.0kb downstream 5000 false Chr5: 18470927-18475926 Arabidopsis thaliana
AT5G45560 10.0kb upstream 10.0kb upstream 15572 true Chr5: 18455355-18470926 Arabidopsis thaliana
AT5G45560 10.0kb upstream 10.0kb upstream 10000 false Chr5: 18455355-18465354 Arabidopsis thaliana
AT5G45560 10.0kb downstream 10.0kb downstream 15572 true Chr5: 18465355-18480926 Arabidopsis thaliana
AT5G45560 10.0kb downstream 10.0kb downstream 10000 false Chr5: 18470927-18480926 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122362836 5261 Brassicaceae View MSA
123837020 5264 Brassicales-Malvales View MSA
124339385 5266 SBM View MSA
124241130 5268 Malvidae View MSA
124064878 5270 Rosid View MSA
123737179 5271 Pentapetalae View MSA
122789263 5272 Eudicot View MSA
122042649 5273 Angiosperm View MSA
121346561 5274 Embryophyte View MSA
123428121 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.698        
cufflinks 6.008        
cufflinks 1.698        
cufflinks 5.276        
cufflinks 1.586        
cufflinks 5.857        

0 Strain