Gene : AT5G45360 A. thaliana TAIR10
Defline:  (1 of 1) PTHR22990 - F-BOX ONLY PROTEIN Genomic Order:  3909
Name:  ? AT5G45360 Secondary Identifier:  ? PAC:19668098
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G45360 0.5kb upstream 0.5kb upstream 2765 true Chr5: 18384521-18387285 Arabidopsis thaliana
AT5G45360 0.5kb upstream 0.5kb upstream 500 false Chr5: 18386786-18387285 Arabidopsis thaliana
AT5G45360 0.5kb downstream 0.5kb downstream 2765 true Chr5: 18384021-18386785 Arabidopsis thaliana
AT5G45360 0.5kb downstream 0.5kb downstream 500 false Chr5: 18384021-18384520 Arabidopsis thaliana
AT5G45360 1.0kb upstream 1.0kb upstream 3265 true Chr5: 18384521-18387785 Arabidopsis thaliana
AT5G45360 1.0kb upstream 1.0kb upstream 1000 false Chr5: 18386786-18387785 Arabidopsis thaliana
AT5G45360 1.0kb downstream 1.0kb downstream 3265 true Chr5: 18383521-18386785 Arabidopsis thaliana
AT5G45360 1.0kb downstream 1.0kb downstream 1000 false Chr5: 18383521-18384520 Arabidopsis thaliana
AT5G45360 2.0kb upstream 2.0kb upstream 4265 true Chr5: 18384521-18388785 Arabidopsis thaliana
AT5G45360 2.0kb upstream 2.0kb upstream 2000 false Chr5: 18386786-18388785 Arabidopsis thaliana
AT5G45360 2.0kb downstream 2.0kb downstream 4265 true Chr5: 18382521-18386785 Arabidopsis thaliana
AT5G45360 2.0kb downstream 2.0kb downstream 2000 false Chr5: 18382521-18384520 Arabidopsis thaliana
AT5G45360 5.0kb upstream 5.0kb upstream 7265 true Chr5: 18384521-18391785 Arabidopsis thaliana
AT5G45360 5.0kb upstream 5.0kb upstream 5000 false Chr5: 18386786-18391785 Arabidopsis thaliana
AT5G45360 5.0kb downstream 5.0kb downstream 7265 true Chr5: 18379521-18386785 Arabidopsis thaliana
AT5G45360 5.0kb downstream 5.0kb downstream 5000 false Chr5: 18379521-18384520 Arabidopsis thaliana
AT5G45360 10.0kb upstream 10.0kb upstream 12265 true Chr5: 18384521-18396785 Arabidopsis thaliana
AT5G45360 10.0kb upstream 10.0kb upstream 10000 false Chr5: 18386786-18396785 Arabidopsis thaliana
AT5G45360 10.0kb downstream 10.0kb downstream 12265 true Chr5: 18374521-18386785 Arabidopsis thaliana
AT5G45360 10.0kb downstream 10.0kb downstream 10000 false Chr5: 18374521-18384520 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041271 5273 Angiosperm View MSA
122377528 5261 Brassicaceae View MSA
123834977 5264 Brassicales-Malvales View MSA
124343065 5266 SBM View MSA
124241059 5268 Malvidae View MSA
124064461 5270 Rosid View MSA
123751585 5271 Pentapetalae View MSA
122789418 5272 Eudicot View MSA
121344604 5274 Embryophyte View MSA
123428680 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 15.938        
cufflinks 18.159        
cufflinks 15.479        
cufflinks 20.86       High
cufflinks 16.795        
cufflinks 15.81        

0 Strain