Gene : DCP5-L A. thaliana TAIR10
Primary Identifier:  ? AT5G45330 Defline:  (1 of 1) PTHR13586//PTHR13586:SF3 - SCD6 PROTEIN-RELATED // DECAPPING 5-LIKE PROTEIN-RELATED
Genomic Order:  3906 Name:  ? AT5G45330
Secondary Identifier:  ? PAC:19671694
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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G45330 0.5kb upstream 0.5kb upstream 3767 true Chr5: 18363406-18367172 Arabidopsis thaliana
AT5G45330 0.5kb upstream 0.5kb upstream 500 false Chr5: 18366673-18367172 Arabidopsis thaliana
AT5G45330 0.5kb downstream 0.5kb downstream 3767 true Chr5: 18362906-18366672 Arabidopsis thaliana
AT5G45330 0.5kb downstream 0.5kb downstream 500 false Chr5: 18362906-18363405 Arabidopsis thaliana
AT5G45330 1.0kb upstream 1.0kb upstream 4267 true Chr5: 18363406-18367672 Arabidopsis thaliana
AT5G45330 1.0kb upstream 1.0kb upstream 1000 false Chr5: 18366673-18367672 Arabidopsis thaliana
AT5G45330 1.0kb downstream 1.0kb downstream 4267 true Chr5: 18362406-18366672 Arabidopsis thaliana
AT5G45330 1.0kb downstream 1.0kb downstream 1000 false Chr5: 18362406-18363405 Arabidopsis thaliana
AT5G45330 2.0kb upstream 2.0kb upstream 5267 true Chr5: 18363406-18368672 Arabidopsis thaliana
AT5G45330 2.0kb upstream 2.0kb upstream 2000 false Chr5: 18366673-18368672 Arabidopsis thaliana
AT5G45330 2.0kb downstream 2.0kb downstream 5267 true Chr5: 18361406-18366672 Arabidopsis thaliana
AT5G45330 2.0kb downstream 2.0kb downstream 2000 false Chr5: 18361406-18363405 Arabidopsis thaliana
AT5G45330 5.0kb upstream 5.0kb upstream 8267 true Chr5: 18363406-18371672 Arabidopsis thaliana
AT5G45330 5.0kb upstream 5.0kb upstream 5000 false Chr5: 18366673-18371672 Arabidopsis thaliana
AT5G45330 5.0kb downstream 5.0kb downstream 8267 true Chr5: 18358406-18366672 Arabidopsis thaliana
AT5G45330 5.0kb downstream 5.0kb downstream 5000 false Chr5: 18358406-18363405 Arabidopsis thaliana
AT5G45330 10.0kb upstream 10.0kb upstream 13267 true Chr5: 18363406-18376672 Arabidopsis thaliana
AT5G45330 10.0kb upstream 10.0kb upstream 10000 false Chr5: 18366673-18376672 Arabidopsis thaliana
AT5G45330 10.0kb downstream 10.0kb downstream 13267 true Chr5: 18353406-18366672 Arabidopsis thaliana
AT5G45330 10.0kb downstream 10.0kb downstream 10000 false Chr5: 18353406-18363405 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121779803 5273 Angiosperm View MSA
122362914 5261 Brassicaceae View MSA
123836911 5264 Brassicales-Malvales View MSA
124346894 5266 SBM View MSA
124245737 5268 Malvidae View MSA
124070995 5270 Rosid View MSA
123744219 5271 Pentapetalae View MSA
122770960 5272 Eudicot View MSA
121051442 5274 Embryophyte View MSA
123428687 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.967        
cufflinks 3.916        
cufflinks 1.817        
cufflinks 4.06        
cufflinks 1.839        
cufflinks 3.839        

0 Strain