Gene : AT5G45190 A. thaliana TAIR10
Defline:  (1 of 5) K15188 - cyclin T (CCNT) Genomic Order:  3892
Name:  ? AT5G45190 Secondary Identifier:  ? PAC:19666305
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G45190 0.5kb upstream 0.5kb upstream 4756 true Chr5: 18277620-18282375 Arabidopsis thaliana
AT5G45190 0.5kb upstream 0.5kb upstream 500 false Chr5: 18281876-18282375 Arabidopsis thaliana
AT5G45190 0.5kb downstream 0.5kb downstream 4756 true Chr5: 18277120-18281875 Arabidopsis thaliana
AT5G45190 0.5kb downstream 0.5kb downstream 500 false Chr5: 18277120-18277619 Arabidopsis thaliana
AT5G45190 1.0kb upstream 1.0kb upstream 5256 true Chr5: 18277620-18282875 Arabidopsis thaliana
AT5G45190 1.0kb upstream 1.0kb upstream 1000 false Chr5: 18281876-18282875 Arabidopsis thaliana
AT5G45190 1.0kb downstream 1.0kb downstream 5256 true Chr5: 18276620-18281875 Arabidopsis thaliana
AT5G45190 1.0kb downstream 1.0kb downstream 1000 false Chr5: 18276620-18277619 Arabidopsis thaliana
AT5G45190 2.0kb upstream 2.0kb upstream 6256 true Chr5: 18277620-18283875 Arabidopsis thaliana
AT5G45190 2.0kb upstream 2.0kb upstream 2000 false Chr5: 18281876-18283875 Arabidopsis thaliana
AT5G45190 2.0kb downstream 2.0kb downstream 6256 true Chr5: 18275620-18281875 Arabidopsis thaliana
AT5G45190 2.0kb downstream 2.0kb downstream 2000 false Chr5: 18275620-18277619 Arabidopsis thaliana
AT5G45190 5.0kb upstream 5.0kb upstream 9256 true Chr5: 18277620-18286875 Arabidopsis thaliana
AT5G45190 5.0kb upstream 5.0kb upstream 5000 false Chr5: 18281876-18286875 Arabidopsis thaliana
AT5G45190 5.0kb downstream 5.0kb downstream 9256 true Chr5: 18272620-18281875 Arabidopsis thaliana
AT5G45190 5.0kb downstream 5.0kb downstream 5000 false Chr5: 18272620-18277619 Arabidopsis thaliana
AT5G45190 10.0kb upstream 10.0kb upstream 14256 true Chr5: 18277620-18291875 Arabidopsis thaliana
AT5G45190 10.0kb upstream 10.0kb upstream 10000 false Chr5: 18281876-18291875 Arabidopsis thaliana
AT5G45190 10.0kb downstream 10.0kb downstream 14256 true Chr5: 18267620-18281875 Arabidopsis thaliana
AT5G45190 10.0kb downstream 10.0kb downstream 10000 false Chr5: 18267620-18277619 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122363183 5261 Brassicaceae View MSA
123828116 5264 Brassicales-Malvales View MSA
124338139 5266 SBM View MSA
124250913 5268 Malvidae View MSA
124064385 5270 Rosid View MSA
123751171 5271 Pentapetalae View MSA
122787254 5272 Eudicot View MSA
122048654 5273 Angiosperm View MSA
123429117 5275 Viridiplantae View MSA
121348365 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.746        
cufflinks 6.814       High
cufflinks 4.609        
cufflinks 7.214       High
cufflinks 4.572        
cufflinks 5.375        

0 Strain