Gene : AT5G44990 A. thaliana TAIR10
Defline:  (1 of 3) PTHR32419//PTHR32419:SF6 - FAMILY NOT NAMED // GLUTATHIONE S-TRANSFERASE OMEGA-LIKE 1-RELATED Genomic Order:  3869
Name:  ? AT5G44990 Secondary Identifier:  ? PAC:19667327
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G44990 0.5kb upstream 0.5kb upstream 2137 true Chr5: 18162632-18164768 Arabidopsis thaliana
AT5G44990 0.5kb upstream 0.5kb upstream 500 false Chr5: 18162632-18163131 Arabidopsis thaliana
AT5G44990 0.5kb downstream 0.5kb downstream 2137 true Chr5: 18163132-18165268 Arabidopsis thaliana
AT5G44990 0.5kb downstream 0.5kb downstream 500 false Chr5: 18164769-18165268 Arabidopsis thaliana
AT5G44990 1.0kb upstream 1.0kb upstream 2637 true Chr5: 18162132-18164768 Arabidopsis thaliana
AT5G44990 1.0kb upstream 1.0kb upstream 1000 false Chr5: 18162132-18163131 Arabidopsis thaliana
AT5G44990 1.0kb downstream 1.0kb downstream 2637 true Chr5: 18163132-18165768 Arabidopsis thaliana
AT5G44990 1.0kb downstream 1.0kb downstream 1000 false Chr5: 18164769-18165768 Arabidopsis thaliana
AT5G44990 2.0kb upstream 2.0kb upstream 3637 true Chr5: 18161132-18164768 Arabidopsis thaliana
AT5G44990 2.0kb upstream 2.0kb upstream 2000 false Chr5: 18161132-18163131 Arabidopsis thaliana
AT5G44990 2.0kb downstream 2.0kb downstream 3637 true Chr5: 18163132-18166768 Arabidopsis thaliana
AT5G44990 2.0kb downstream 2.0kb downstream 2000 false Chr5: 18164769-18166768 Arabidopsis thaliana
AT5G44990 5.0kb upstream 5.0kb upstream 6637 true Chr5: 18158132-18164768 Arabidopsis thaliana
AT5G44990 5.0kb upstream 5.0kb upstream 5000 false Chr5: 18158132-18163131 Arabidopsis thaliana
AT5G44990 5.0kb downstream 5.0kb downstream 6637 true Chr5: 18163132-18169768 Arabidopsis thaliana
AT5G44990 5.0kb downstream 5.0kb downstream 5000 false Chr5: 18164769-18169768 Arabidopsis thaliana
AT5G44990 10.0kb upstream 10.0kb upstream 11637 true Chr5: 18153132-18164768 Arabidopsis thaliana
AT5G44990 10.0kb upstream 10.0kb upstream 10000 false Chr5: 18153132-18163131 Arabidopsis thaliana
AT5G44990 10.0kb downstream 10.0kb downstream 11637 true Chr5: 18163132-18174768 Arabidopsis thaliana
AT5G44990 10.0kb downstream 10.0kb downstream 10000 false Chr5: 18164769-18174768 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121511167 5273 Angiosperm View MSA
122373148 5261 Brassicaceae View MSA
123800504 5264 Brassicales-Malvales View MSA
124297914 5266 SBM View MSA
124149687 5268 Malvidae View MSA
123875443 5270 Rosid View MSA
123459260 5271 Pentapetalae View MSA
122494654 5272 Eudicot View MSA
120784226 5274 Embryophyte View MSA
122826154 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.868       High
cufflinks 0.135     Low Low
cufflinks 0.263     Low  
cufflinks 0.368     Low  
cufflinks 0.455        
cufflinks 0.127     Low Low

0 Strain