Gene : CHR4 A. thaliana TAIR10
Primary Identifier:  ? AT5G44800 Defline:  (1 of 1) PTHR10799:SF725 - IMMUNOGLOBULIN E-SET DOMAIN-CONTAINING PROTEIN
Genomic Order:  3851 Name:  ? AT5G44800
Secondary Identifier:  ? PAC:19672345
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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G44800 0.5kb upstream 0.5kb upstream 10534 true Chr5: 18083419-18093952 Arabidopsis thaliana
AT5G44800 0.5kb upstream 0.5kb upstream 500 false Chr5: 18093453-18093952 Arabidopsis thaliana
AT5G44800 0.5kb downstream 0.5kb downstream 10534 true Chr5: 18082919-18093452 Arabidopsis thaliana
AT5G44800 0.5kb downstream 0.5kb downstream 500 false Chr5: 18082919-18083418 Arabidopsis thaliana
AT5G44800 1.0kb upstream 1.0kb upstream 11034 true Chr5: 18083419-18094452 Arabidopsis thaliana
AT5G44800 1.0kb upstream 1.0kb upstream 1000 false Chr5: 18093453-18094452 Arabidopsis thaliana
AT5G44800 1.0kb downstream 1.0kb downstream 11034 true Chr5: 18082419-18093452 Arabidopsis thaliana
AT5G44800 1.0kb downstream 1.0kb downstream 1000 false Chr5: 18082419-18083418 Arabidopsis thaliana
AT5G44800 2.0kb upstream 2.0kb upstream 12034 true Chr5: 18083419-18095452 Arabidopsis thaliana
AT5G44800 2.0kb upstream 2.0kb upstream 2000 false Chr5: 18093453-18095452 Arabidopsis thaliana
AT5G44800 2.0kb downstream 2.0kb downstream 12034 true Chr5: 18081419-18093452 Arabidopsis thaliana
AT5G44800 2.0kb downstream 2.0kb downstream 2000 false Chr5: 18081419-18083418 Arabidopsis thaliana
AT5G44800 5.0kb upstream 5.0kb upstream 15034 true Chr5: 18083419-18098452 Arabidopsis thaliana
AT5G44800 5.0kb upstream 5.0kb upstream 5000 false Chr5: 18093453-18098452 Arabidopsis thaliana
AT5G44800 5.0kb downstream 5.0kb downstream 15034 true Chr5: 18078419-18093452 Arabidopsis thaliana
AT5G44800 5.0kb downstream 5.0kb downstream 5000 false Chr5: 18078419-18083418 Arabidopsis thaliana
AT5G44800 10.0kb upstream 10.0kb upstream 20034 true Chr5: 18083419-18103452 Arabidopsis thaliana
AT5G44800 10.0kb upstream 10.0kb upstream 10000 false Chr5: 18093453-18103452 Arabidopsis thaliana
AT5G44800 10.0kb downstream 10.0kb downstream 20034 true Chr5: 18073419-18093452 Arabidopsis thaliana
AT5G44800 10.0kb downstream 10.0kb downstream 10000 false Chr5: 18073419-18083418 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122366272 5261 Brassicaceae View MSA
123831424 5264 Brassicales-Malvales View MSA
124339682 5266 SBM View MSA
124242191 5268 Malvidae View MSA
124067092 5270 Rosid View MSA
123742521 5271 Pentapetalae View MSA
122789945 5272 Eudicot View MSA
122042077 5273 Angiosperm View MSA
121346690 5274 Embryophyte View MSA
123428510 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 9.307        
cufflinks 12.408        
cufflinks 8.024       Low
cufflinks 13.488       High
cufflinks 8.063       Low
cufflinks 11.931        

0 Strain