Gene : AT5G44860 A. thaliana TAIR10
Defline:  (1 of 3) PTHR33133:SF12 - F28K20.6 PROTEIN-RELATED Genomic Order:  3856
Name:  ? AT5G44860 Secondary Identifier:  ? PAC:19665245
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G44860 0.5kb upstream 0.5kb upstream 1855 true Chr5: 18110458-18112312 Arabidopsis thaliana
AT5G44860 0.5kb upstream 0.5kb upstream 500 false Chr5: 18111813-18112312 Arabidopsis thaliana
AT5G44860 0.5kb downstream 0.5kb downstream 1855 true Chr5: 18109958-18111812 Arabidopsis thaliana
AT5G44860 0.5kb downstream 0.5kb downstream 500 false Chr5: 18109958-18110457 Arabidopsis thaliana
AT5G44860 1.0kb upstream 1.0kb upstream 2355 true Chr5: 18110458-18112812 Arabidopsis thaliana
AT5G44860 1.0kb upstream 1.0kb upstream 1000 false Chr5: 18111813-18112812 Arabidopsis thaliana
AT5G44860 1.0kb downstream 1.0kb downstream 2355 true Chr5: 18109458-18111812 Arabidopsis thaliana
AT5G44860 1.0kb downstream 1.0kb downstream 1000 false Chr5: 18109458-18110457 Arabidopsis thaliana
AT5G44860 2.0kb upstream 2.0kb upstream 3355 true Chr5: 18110458-18113812 Arabidopsis thaliana
AT5G44860 2.0kb upstream 2.0kb upstream 2000 false Chr5: 18111813-18113812 Arabidopsis thaliana
AT5G44860 2.0kb downstream 2.0kb downstream 3355 true Chr5: 18108458-18111812 Arabidopsis thaliana
AT5G44860 2.0kb downstream 2.0kb downstream 2000 false Chr5: 18108458-18110457 Arabidopsis thaliana
AT5G44860 5.0kb upstream 5.0kb upstream 6355 true Chr5: 18110458-18116812 Arabidopsis thaliana
AT5G44860 5.0kb upstream 5.0kb upstream 5000 false Chr5: 18111813-18116812 Arabidopsis thaliana
AT5G44860 5.0kb downstream 5.0kb downstream 6355 true Chr5: 18105458-18111812 Arabidopsis thaliana
AT5G44860 5.0kb downstream 5.0kb downstream 5000 false Chr5: 18105458-18110457 Arabidopsis thaliana
AT5G44860 10.0kb upstream 10.0kb upstream 11355 true Chr5: 18110458-18121812 Arabidopsis thaliana
AT5G44860 10.0kb upstream 10.0kb upstream 10000 false Chr5: 18111813-18121812 Arabidopsis thaliana
AT5G44860 10.0kb downstream 10.0kb downstream 11355 true Chr5: 18100458-18111812 Arabidopsis thaliana
AT5G44860 10.0kb downstream 10.0kb downstream 10000 false Chr5: 18100458-18110457 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122367980 5261 Brassicaceae View MSA
123839199 5264 Brassicales-Malvales View MSA
124350918 5266 SBM View MSA
124245716 5268 Malvidae View MSA
124072395 5270 Rosid View MSA
123752432 5271 Pentapetalae View MSA
122795545 5272 Eudicot View MSA
122047131 5273 Angiosperm View MSA
121347581 5274 Embryophyte View MSA
123380576 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 15.966        
cufflinks 14.44        
cufflinks 10.681       Low
cufflinks 15.585        
cufflinks 11.342       Low
cufflinks 15.404        

0 Strain