Gene : AT5G44940 A. thaliana TAIR10
Defline:  (1 of 16) PF00646//PF08387 - F-box domain (F-box) // FBD (FBD) Genomic Order:  3863
Name:  ? AT5G44940 Secondary Identifier:  ? PAC:19672011
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G44940 0.5kb upstream 0.5kb upstream 2024 true Chr5: 18148869-18150892 Arabidopsis thaliana
AT5G44940 0.5kb upstream 0.5kb upstream 500 false Chr5: 18148869-18149368 Arabidopsis thaliana
AT5G44940 0.5kb downstream 0.5kb downstream 2024 true Chr5: 18149369-18151392 Arabidopsis thaliana
AT5G44940 0.5kb downstream 0.5kb downstream 500 false Chr5: 18150893-18151392 Arabidopsis thaliana
AT5G44940 1.0kb upstream 1.0kb upstream 2524 true Chr5: 18148369-18150892 Arabidopsis thaliana
AT5G44940 1.0kb upstream 1.0kb upstream 1000 false Chr5: 18148369-18149368 Arabidopsis thaliana
AT5G44940 1.0kb downstream 1.0kb downstream 2524 true Chr5: 18149369-18151892 Arabidopsis thaliana
AT5G44940 1.0kb downstream 1.0kb downstream 1000 false Chr5: 18150893-18151892 Arabidopsis thaliana
AT5G44940 2.0kb upstream 2.0kb upstream 3524 true Chr5: 18147369-18150892 Arabidopsis thaliana
AT5G44940 2.0kb upstream 2.0kb upstream 2000 false Chr5: 18147369-18149368 Arabidopsis thaliana
AT5G44940 2.0kb downstream 2.0kb downstream 3524 true Chr5: 18149369-18152892 Arabidopsis thaliana
AT5G44940 2.0kb downstream 2.0kb downstream 2000 false Chr5: 18150893-18152892 Arabidopsis thaliana
AT5G44940 5.0kb upstream 5.0kb upstream 6524 true Chr5: 18144369-18150892 Arabidopsis thaliana
AT5G44940 5.0kb upstream 5.0kb upstream 5000 false Chr5: 18144369-18149368 Arabidopsis thaliana
AT5G44940 5.0kb downstream 5.0kb downstream 6524 true Chr5: 18149369-18155892 Arabidopsis thaliana
AT5G44940 5.0kb downstream 5.0kb downstream 5000 false Chr5: 18150893-18155892 Arabidopsis thaliana
AT5G44940 10.0kb upstream 10.0kb upstream 11524 true Chr5: 18139369-18150892 Arabidopsis thaliana
AT5G44940 10.0kb upstream 10.0kb upstream 10000 false Chr5: 18139369-18149368 Arabidopsis thaliana
AT5G44940 10.0kb downstream 10.0kb downstream 11524 true Chr5: 18149369-18160892 Arabidopsis thaliana
AT5G44940 10.0kb downstream 10.0kb downstream 10000 false Chr5: 18150893-18160892 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122338722 5261 Brassicaceae View MSA
123779273 5264 Brassicales-Malvales View MSA
124277603 5266 SBM View MSA
124132790 5268 Malvidae View MSA
123861051 5270 Rosid View MSA
123753592 5271 Pentapetalae View MSA
122797964 5272 Eudicot View MSA
122050940 5273 Angiosperm View MSA
121351679 5274 Embryophyte View MSA
123382274 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.01     Low  
cufflinks 0.04     Low High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.021     Low  
cufflinks 0.011     Low  
cufflinks 0.0     Not Expressed Not Expressed

0 Strain