Sequence Feature Displayer
Ontology Annotation Displayer
4 Pathways
Pathway Identifier | Organism Name | Analysis Method | Analysis Status |
---|---|---|---|
Athaliana PWY-5176 | Arabidopsis thaliana | pathologic | |
Athaliana PWY-7089 | Arabidopsis thaliana | pathologic | |
Athaliana PWY-7091 | Arabidopsis thaliana | pathologic | |
Athaliana PWY-7092 | Arabidopsis thaliana | pathologic |
Other
20 Flanking Regions
Region Name | Flank Size | Direction | Length | Gene Included? | Chromosome Location | Organism Name |
---|---|---|---|---|---|---|
AT5G44640 0.5kb upstream | 0.5kb | upstream | 2237 | true | Chr5: 18010646-18012882 | Arabidopsis thaliana |
AT5G44640 0.5kb upstream | 0.5kb | upstream | 500 | false | Chr5: 18010646-18011145 | Arabidopsis thaliana |
AT5G44640 0.5kb downstream | 0.5kb | downstream | 2237 | true | Chr5: 18011146-18013382 | Arabidopsis thaliana |
AT5G44640 0.5kb downstream | 0.5kb | downstream | 500 | false | Chr5: 18012883-18013382 | Arabidopsis thaliana |
AT5G44640 1.0kb upstream | 1.0kb | upstream | 2737 | true | Chr5: 18010146-18012882 | Arabidopsis thaliana |
AT5G44640 1.0kb upstream | 1.0kb | upstream | 1000 | false | Chr5: 18010146-18011145 | Arabidopsis thaliana |
AT5G44640 1.0kb downstream | 1.0kb | downstream | 2737 | true | Chr5: 18011146-18013882 | Arabidopsis thaliana |
AT5G44640 1.0kb downstream | 1.0kb | downstream | 1000 | false | Chr5: 18012883-18013882 | Arabidopsis thaliana |
AT5G44640 2.0kb upstream | 2.0kb | upstream | 3737 | true | Chr5: 18009146-18012882 | Arabidopsis thaliana |
AT5G44640 2.0kb upstream | 2.0kb | upstream | 2000 | false | Chr5: 18009146-18011145 | Arabidopsis thaliana |
AT5G44640 2.0kb downstream | 2.0kb | downstream | 3737 | true | Chr5: 18011146-18014882 | Arabidopsis thaliana |
AT5G44640 2.0kb downstream | 2.0kb | downstream | 2000 | false | Chr5: 18012883-18014882 | Arabidopsis thaliana |
AT5G44640 5.0kb upstream | 5.0kb | upstream | 6737 | true | Chr5: 18006146-18012882 | Arabidopsis thaliana |
AT5G44640 5.0kb upstream | 5.0kb | upstream | 5000 | false | Chr5: 18006146-18011145 | Arabidopsis thaliana |
AT5G44640 5.0kb downstream | 5.0kb | downstream | 6737 | true | Chr5: 18011146-18017882 | Arabidopsis thaliana |
AT5G44640 5.0kb downstream | 5.0kb | downstream | 5000 | false | Chr5: 18012883-18017882 | Arabidopsis thaliana |
AT5G44640 10.0kb upstream | 10.0kb | upstream | 11737 | true | Chr5: 18001146-18012882 | Arabidopsis thaliana |
AT5G44640 10.0kb upstream | 10.0kb | upstream | 10000 | false | Chr5: 18001146-18011145 | Arabidopsis thaliana |
AT5G44640 10.0kb downstream | 10.0kb | downstream | 11737 | true | Chr5: 18011146-18022882 | Arabidopsis thaliana |
AT5G44640 10.0kb downstream | 10.0kb | downstream | 10000 | false | Chr5: 18012883-18022882 | Arabidopsis thaliana |
10 Protein Familys
Cluster ID | Method ID | Method Name | Sequence Alignment |
---|---|---|---|
122380441 | 5261 | Brassicaceae | View MSA |
123802716 | 5264 | Brassicales-Malvales | View MSA |
124350500 | 5266 | SBM | View MSA |
124252389 | 5268 | Malvidae | View MSA |
124071856 | 5270 | Rosid | View MSA |
123753517 | 5271 | Pentapetalae | View MSA |
122797747 | 5272 | Eudicot | View MSA |
122051599 | 5273 | Angiosperm | View MSA |
121350182 | 5274 | Embryophyte | View MSA |
123428830 | 5275 | Viridiplantae | View MSA |
6 Rna Seq Expressionss
Analysis Method | Abundance | Low Confidence Limit | High Confidence Limit | Relative Library Expression | Relative Locus Expression |
---|---|---|---|---|---|
cufflinks | 0.0 | Not Expressed | Not Expressed | ||
cufflinks | 0.009 | Low | |||
cufflinks | 0.0 | Not Expressed | Not Expressed | ||
cufflinks | 0.0 | Not Expressed | Not Expressed | ||
cufflinks | 0.0 | Not Expressed | Not Expressed | ||
cufflinks | 0.027 | Low |