Gene : AT5G44670 A. thaliana TAIR10
Defline:  (1 of 2) KOG4735 - Extracellular protein with conserved cysteines Genomic Order:  3837
Name:  ? AT5G44670 Secondary Identifier:  ? PAC:19666114
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G44670 0.5kb upstream 0.5kb upstream 2981 true Chr5: 18018905-18021885 Arabidopsis thaliana
AT5G44670 0.5kb upstream 0.5kb upstream 500 false Chr5: 18021386-18021885 Arabidopsis thaliana
AT5G44670 0.5kb downstream 0.5kb downstream 2981 true Chr5: 18018405-18021385 Arabidopsis thaliana
AT5G44670 0.5kb downstream 0.5kb downstream 500 false Chr5: 18018405-18018904 Arabidopsis thaliana
AT5G44670 1.0kb upstream 1.0kb upstream 3481 true Chr5: 18018905-18022385 Arabidopsis thaliana
AT5G44670 1.0kb upstream 1.0kb upstream 1000 false Chr5: 18021386-18022385 Arabidopsis thaliana
AT5G44670 1.0kb downstream 1.0kb downstream 3481 true Chr5: 18017905-18021385 Arabidopsis thaliana
AT5G44670 1.0kb downstream 1.0kb downstream 1000 false Chr5: 18017905-18018904 Arabidopsis thaliana
AT5G44670 2.0kb upstream 2.0kb upstream 4481 true Chr5: 18018905-18023385 Arabidopsis thaliana
AT5G44670 2.0kb upstream 2.0kb upstream 2000 false Chr5: 18021386-18023385 Arabidopsis thaliana
AT5G44670 2.0kb downstream 2.0kb downstream 4481 true Chr5: 18016905-18021385 Arabidopsis thaliana
AT5G44670 2.0kb downstream 2.0kb downstream 2000 false Chr5: 18016905-18018904 Arabidopsis thaliana
AT5G44670 5.0kb upstream 5.0kb upstream 7481 true Chr5: 18018905-18026385 Arabidopsis thaliana
AT5G44670 5.0kb upstream 5.0kb upstream 5000 false Chr5: 18021386-18026385 Arabidopsis thaliana
AT5G44670 5.0kb downstream 5.0kb downstream 7481 true Chr5: 18013905-18021385 Arabidopsis thaliana
AT5G44670 5.0kb downstream 5.0kb downstream 5000 false Chr5: 18013905-18018904 Arabidopsis thaliana
AT5G44670 10.0kb upstream 10.0kb upstream 12481 true Chr5: 18018905-18031385 Arabidopsis thaliana
AT5G44670 10.0kb upstream 10.0kb upstream 10000 false Chr5: 18021386-18031385 Arabidopsis thaliana
AT5G44670 10.0kb downstream 10.0kb downstream 12481 true Chr5: 18008905-18021385 Arabidopsis thaliana
AT5G44670 10.0kb downstream 10.0kb downstream 10000 false Chr5: 18008905-18018904 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122369147 5261 Brassicaceae View MSA
123837077 5264 Brassicales-Malvales View MSA
124344324 5266 SBM View MSA
124244993 5268 Malvidae View MSA
124065457 5270 Rosid View MSA
123737464 5271 Pentapetalae View MSA
122793507 5272 Eudicot View MSA
122044541 5273 Angiosperm View MSA
121348152 5274 Embryophyte View MSA
123380747 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.365        
cufflinks 27.065        
cufflinks 4.858        
cufflinks 25.061        
cufflinks 4.826        
cufflinks 31.181     High High

0 Strain