Gene : AT5G44530 A. thaliana TAIR10
Defline:  (1 of 3) PTHR10795:SF439 - SERINE PROTEINASE-RELATED Genomic Order:  3814
Name:  ? AT5G44530 Secondary Identifier:  ? PAC:19671424
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G44530 0.5kb upstream 0.5kb upstream 4104 true Chr5: 17937189-17941292 Arabidopsis thaliana
AT5G44530 0.5kb upstream 0.5kb upstream 500 false Chr5: 17937189-17937688 Arabidopsis thaliana
AT5G44530 0.5kb downstream 0.5kb downstream 4104 true Chr5: 17937689-17941792 Arabidopsis thaliana
AT5G44530 0.5kb downstream 0.5kb downstream 500 false Chr5: 17941293-17941792 Arabidopsis thaliana
AT5G44530 1.0kb upstream 1.0kb upstream 4604 true Chr5: 17936689-17941292 Arabidopsis thaliana
AT5G44530 1.0kb upstream 1.0kb upstream 1000 false Chr5: 17936689-17937688 Arabidopsis thaliana
AT5G44530 1.0kb downstream 1.0kb downstream 4604 true Chr5: 17937689-17942292 Arabidopsis thaliana
AT5G44530 1.0kb downstream 1.0kb downstream 1000 false Chr5: 17941293-17942292 Arabidopsis thaliana
AT5G44530 2.0kb upstream 2.0kb upstream 5604 true Chr5: 17935689-17941292 Arabidopsis thaliana
AT5G44530 2.0kb upstream 2.0kb upstream 2000 false Chr5: 17935689-17937688 Arabidopsis thaliana
AT5G44530 2.0kb downstream 2.0kb downstream 5604 true Chr5: 17937689-17943292 Arabidopsis thaliana
AT5G44530 2.0kb downstream 2.0kb downstream 2000 false Chr5: 17941293-17943292 Arabidopsis thaliana
AT5G44530 5.0kb upstream 5.0kb upstream 8604 true Chr5: 17932689-17941292 Arabidopsis thaliana
AT5G44530 5.0kb upstream 5.0kb upstream 5000 false Chr5: 17932689-17937688 Arabidopsis thaliana
AT5G44530 5.0kb downstream 5.0kb downstream 8604 true Chr5: 17937689-17946292 Arabidopsis thaliana
AT5G44530 5.0kb downstream 5.0kb downstream 5000 false Chr5: 17941293-17946292 Arabidopsis thaliana
AT5G44530 10.0kb upstream 10.0kb upstream 13604 true Chr5: 17927689-17941292 Arabidopsis thaliana
AT5G44530 10.0kb upstream 10.0kb upstream 10000 false Chr5: 17927689-17937688 Arabidopsis thaliana
AT5G44530 10.0kb downstream 10.0kb downstream 13604 true Chr5: 17937689-17951292 Arabidopsis thaliana
AT5G44530 10.0kb downstream 10.0kb downstream 10000 false Chr5: 17941293-17951292 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122372302 5261 Brassicaceae View MSA
123837715 5264 Brassicales-Malvales View MSA
124342131 5266 SBM View MSA
124238736 5268 Malvidae View MSA
124064496 5270 Rosid View MSA
123736730 5271 Pentapetalae View MSA
122789485 5272 Eudicot View MSA
122043017 5273 Angiosperm View MSA
121352132 5274 Embryophyte View MSA
123382560 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.407        
cufflinks 1.472       Low
cufflinks 7.489        
cufflinks 2.03        
cufflinks 8.373       High
cufflinks 2.27        

0 Strain