Gene : AT5G44320 A. thaliana TAIR10
Defline:  (1 of 2) K03251 - translation initiation factor 3 subunit D (EIF3D) Genomic Order:  3791
Name:  ? AT5G44320 Secondary Identifier:  ? PAC:19665531
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G44320 0.5kb upstream 0.5kb upstream 2592 true Chr5: 17854589-17857180 Arabidopsis thaliana
AT5G44320 0.5kb upstream 0.5kb upstream 500 false Chr5: 17856681-17857180 Arabidopsis thaliana
AT5G44320 0.5kb downstream 0.5kb downstream 2592 true Chr5: 17854089-17856680 Arabidopsis thaliana
AT5G44320 0.5kb downstream 0.5kb downstream 500 false Chr5: 17854089-17854588 Arabidopsis thaliana
AT5G44320 1.0kb upstream 1.0kb upstream 3092 true Chr5: 17854589-17857680 Arabidopsis thaliana
AT5G44320 1.0kb upstream 1.0kb upstream 1000 false Chr5: 17856681-17857680 Arabidopsis thaliana
AT5G44320 1.0kb downstream 1.0kb downstream 3092 true Chr5: 17853589-17856680 Arabidopsis thaliana
AT5G44320 1.0kb downstream 1.0kb downstream 1000 false Chr5: 17853589-17854588 Arabidopsis thaliana
AT5G44320 2.0kb upstream 2.0kb upstream 4092 true Chr5: 17854589-17858680 Arabidopsis thaliana
AT5G44320 2.0kb upstream 2.0kb upstream 2000 false Chr5: 17856681-17858680 Arabidopsis thaliana
AT5G44320 2.0kb downstream 2.0kb downstream 4092 true Chr5: 17852589-17856680 Arabidopsis thaliana
AT5G44320 2.0kb downstream 2.0kb downstream 2000 false Chr5: 17852589-17854588 Arabidopsis thaliana
AT5G44320 5.0kb upstream 5.0kb upstream 7092 true Chr5: 17854589-17861680 Arabidopsis thaliana
AT5G44320 5.0kb upstream 5.0kb upstream 5000 false Chr5: 17856681-17861680 Arabidopsis thaliana
AT5G44320 5.0kb downstream 5.0kb downstream 7092 true Chr5: 17849589-17856680 Arabidopsis thaliana
AT5G44320 5.0kb downstream 5.0kb downstream 5000 false Chr5: 17849589-17854588 Arabidopsis thaliana
AT5G44320 10.0kb upstream 10.0kb upstream 12092 true Chr5: 17854589-17866680 Arabidopsis thaliana
AT5G44320 10.0kb upstream 10.0kb upstream 10000 false Chr5: 17856681-17866680 Arabidopsis thaliana
AT5G44320 10.0kb downstream 10.0kb downstream 12092 true Chr5: 17844589-17856680 Arabidopsis thaliana
AT5G44320 10.0kb downstream 10.0kb downstream 10000 false Chr5: 17844589-17854588 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041522 5273 Angiosperm View MSA
122379520 5261 Brassicaceae View MSA
123840078 5264 Brassicales-Malvales View MSA
124336794 5266 SBM View MSA
124242257 5268 Malvidae View MSA
124061322 5270 Rosid View MSA
123739526 5271 Pentapetalae View MSA
122787670 5272 Eudicot View MSA
121344825 5274 Embryophyte View MSA
123426210 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 30.983     High Low
cufflinks 40.931     High  
cufflinks 35.334     High  
cufflinks 44.459     High High
cufflinks 32.841     High  
cufflinks 42.509     High  

0 Strain