Gene : AT5G44310 A. thaliana TAIR10
Defline:  (1 of 2) PTHR23241:SF65 - LATE EMBRYOGENESIS ABUNDANT PROTEIN (LEA) FAMILY PROTEIN-RELATED Genomic Order:  3789
Name:  ? AT5G44310 Secondary Identifier:  ? PAC:19671831
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G44310 0.5kb upstream 0.5kb upstream 2256 true Chr5: 17847781-17850036 Arabidopsis thaliana
AT5G44310 0.5kb upstream 0.5kb upstream 500 false Chr5: 17849537-17850036 Arabidopsis thaliana
AT5G44310 0.5kb downstream 0.5kb downstream 2256 true Chr5: 17847281-17849536 Arabidopsis thaliana
AT5G44310 0.5kb downstream 0.5kb downstream 500 false Chr5: 17847281-17847780 Arabidopsis thaliana
AT5G44310 1.0kb upstream 1.0kb upstream 2756 true Chr5: 17847781-17850536 Arabidopsis thaliana
AT5G44310 1.0kb upstream 1.0kb upstream 1000 false Chr5: 17849537-17850536 Arabidopsis thaliana
AT5G44310 1.0kb downstream 1.0kb downstream 2756 true Chr5: 17846781-17849536 Arabidopsis thaliana
AT5G44310 1.0kb downstream 1.0kb downstream 1000 false Chr5: 17846781-17847780 Arabidopsis thaliana
AT5G44310 2.0kb upstream 2.0kb upstream 3756 true Chr5: 17847781-17851536 Arabidopsis thaliana
AT5G44310 2.0kb upstream 2.0kb upstream 2000 false Chr5: 17849537-17851536 Arabidopsis thaliana
AT5G44310 2.0kb downstream 2.0kb downstream 3756 true Chr5: 17845781-17849536 Arabidopsis thaliana
AT5G44310 2.0kb downstream 2.0kb downstream 2000 false Chr5: 17845781-17847780 Arabidopsis thaliana
AT5G44310 5.0kb upstream 5.0kb upstream 6756 true Chr5: 17847781-17854536 Arabidopsis thaliana
AT5G44310 5.0kb upstream 5.0kb upstream 5000 false Chr5: 17849537-17854536 Arabidopsis thaliana
AT5G44310 5.0kb downstream 5.0kb downstream 6756 true Chr5: 17842781-17849536 Arabidopsis thaliana
AT5G44310 5.0kb downstream 5.0kb downstream 5000 false Chr5: 17842781-17847780 Arabidopsis thaliana
AT5G44310 10.0kb upstream 10.0kb upstream 11756 true Chr5: 17847781-17859536 Arabidopsis thaliana
AT5G44310 10.0kb upstream 10.0kb upstream 10000 false Chr5: 17849537-17859536 Arabidopsis thaliana
AT5G44310 10.0kb downstream 10.0kb downstream 11756 true Chr5: 17837781-17849536 Arabidopsis thaliana
AT5G44310 10.0kb downstream 10.0kb downstream 10000 false Chr5: 17837781-17847780 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122373033 5261 Brassicaceae View MSA
123841274 5264 Brassicales-Malvales View MSA
124341278 5266 SBM View MSA
124250059 5268 Malvidae View MSA
124071734 5270 Rosid View MSA
123743630 5271 Pentapetalae View MSA
122796443 5272 Eudicot View MSA
122050999 5273 Angiosperm View MSA
121350297 5274 Embryophyte View MSA
123428296 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.005     Low Low
cufflinks 0.595       High
cufflinks 0.005     Low Low
cufflinks 0.083     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.267     Low  

0 Strain