Gene : AT5G47710 A. thaliana TAIR10
Defline:  (1 of 2) PTHR23180:SF249 - ADP-RIBOSYLATION FACTOR GTPASE-ACTIVATING PROTEIN AGD11-RELATED Genomic Order:  4165
Name:  ? AT5G47710 Secondary Identifier:  ? PAC:19670428
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G47710 0.5kb upstream 0.5kb upstream 2155 true Chr5: 19329175-19331329 Arabidopsis thaliana
AT5G47710 0.5kb upstream 0.5kb upstream 500 false Chr5: 19329175-19329674 Arabidopsis thaliana
AT5G47710 0.5kb downstream 0.5kb downstream 2155 true Chr5: 19329675-19331829 Arabidopsis thaliana
AT5G47710 0.5kb downstream 0.5kb downstream 500 false Chr5: 19331330-19331829 Arabidopsis thaliana
AT5G47710 1.0kb upstream 1.0kb upstream 2655 true Chr5: 19328675-19331329 Arabidopsis thaliana
AT5G47710 1.0kb upstream 1.0kb upstream 1000 false Chr5: 19328675-19329674 Arabidopsis thaliana
AT5G47710 1.0kb downstream 1.0kb downstream 2655 true Chr5: 19329675-19332329 Arabidopsis thaliana
AT5G47710 1.0kb downstream 1.0kb downstream 1000 false Chr5: 19331330-19332329 Arabidopsis thaliana
AT5G47710 2.0kb upstream 2.0kb upstream 3655 true Chr5: 19327675-19331329 Arabidopsis thaliana
AT5G47710 2.0kb upstream 2.0kb upstream 2000 false Chr5: 19327675-19329674 Arabidopsis thaliana
AT5G47710 2.0kb downstream 2.0kb downstream 3655 true Chr5: 19329675-19333329 Arabidopsis thaliana
AT5G47710 2.0kb downstream 2.0kb downstream 2000 false Chr5: 19331330-19333329 Arabidopsis thaliana
AT5G47710 5.0kb upstream 5.0kb upstream 6655 true Chr5: 19324675-19331329 Arabidopsis thaliana
AT5G47710 5.0kb upstream 5.0kb upstream 5000 false Chr5: 19324675-19329674 Arabidopsis thaliana
AT5G47710 5.0kb downstream 5.0kb downstream 6655 true Chr5: 19329675-19336329 Arabidopsis thaliana
AT5G47710 5.0kb downstream 5.0kb downstream 5000 false Chr5: 19331330-19336329 Arabidopsis thaliana
AT5G47710 10.0kb upstream 10.0kb upstream 11655 true Chr5: 19319675-19331329 Arabidopsis thaliana
AT5G47710 10.0kb upstream 10.0kb upstream 10000 false Chr5: 19319675-19329674 Arabidopsis thaliana
AT5G47710 10.0kb downstream 10.0kb downstream 11655 true Chr5: 19329675-19341329 Arabidopsis thaliana
AT5G47710 10.0kb downstream 10.0kb downstream 10000 false Chr5: 19331330-19341329 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122363116 5261 Brassicaceae View MSA
123829571 5264 Brassicales-Malvales View MSA
124350205 5266 SBM View MSA
124238858 5268 Malvidae View MSA
124063417 5270 Rosid View MSA
123745125 5271 Pentapetalae View MSA
122791295 5272 Eudicot View MSA
122045342 5273 Angiosperm View MSA
121310436 5274 Embryophyte View MSA
123347920 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.605        
cufflinks 14.507       High
cufflinks 4.135        
cufflinks 12.256        
cufflinks 4.266        
cufflinks 12.937        

0 Strain