Gene : NF-YB2 A. thaliana TAIR10
Primary Identifier:  ? AT5G47640 Defline:  (1 of 3) PTHR11064//PTHR11064:SF27 - CCAAT-BINDING TRANSCRIPTION FACTOR-RELATED // NUCLEAR TRANSCRIPTION FACTOR Y SUBUNIT B-2-RELATED
Genomic Order:  4158 Name:  ? AT5G47640
Secondary Identifier:  ? PAC:19669526
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G47640 0.5kb upstream 0.5kb upstream 1546 true Chr5: 19308727-19310272 Arabidopsis thaliana
AT5G47640 0.5kb upstream 0.5kb upstream 500 false Chr5: 19308727-19309226 Arabidopsis thaliana
AT5G47640 0.5kb downstream 0.5kb downstream 1546 true Chr5: 19309227-19310772 Arabidopsis thaliana
AT5G47640 0.5kb downstream 0.5kb downstream 500 false Chr5: 19310273-19310772 Arabidopsis thaliana
AT5G47640 1.0kb upstream 1.0kb upstream 2046 true Chr5: 19308227-19310272 Arabidopsis thaliana
AT5G47640 1.0kb upstream 1.0kb upstream 1000 false Chr5: 19308227-19309226 Arabidopsis thaliana
AT5G47640 1.0kb downstream 1.0kb downstream 2046 true Chr5: 19309227-19311272 Arabidopsis thaliana
AT5G47640 1.0kb downstream 1.0kb downstream 1000 false Chr5: 19310273-19311272 Arabidopsis thaliana
AT5G47640 2.0kb upstream 2.0kb upstream 3046 true Chr5: 19307227-19310272 Arabidopsis thaliana
AT5G47640 2.0kb upstream 2.0kb upstream 2000 false Chr5: 19307227-19309226 Arabidopsis thaliana
AT5G47640 2.0kb downstream 2.0kb downstream 3046 true Chr5: 19309227-19312272 Arabidopsis thaliana
AT5G47640 2.0kb downstream 2.0kb downstream 2000 false Chr5: 19310273-19312272 Arabidopsis thaliana
AT5G47640 5.0kb upstream 5.0kb upstream 6046 true Chr5: 19304227-19310272 Arabidopsis thaliana
AT5G47640 5.0kb upstream 5.0kb upstream 5000 false Chr5: 19304227-19309226 Arabidopsis thaliana
AT5G47640 5.0kb downstream 5.0kb downstream 6046 true Chr5: 19309227-19315272 Arabidopsis thaliana
AT5G47640 5.0kb downstream 5.0kb downstream 5000 false Chr5: 19310273-19315272 Arabidopsis thaliana
AT5G47640 10.0kb upstream 10.0kb upstream 11046 true Chr5: 19299227-19310272 Arabidopsis thaliana
AT5G47640 10.0kb upstream 10.0kb upstream 10000 false Chr5: 19299227-19309226 Arabidopsis thaliana
AT5G47640 10.0kb downstream 10.0kb downstream 11046 true Chr5: 19309227-19320272 Arabidopsis thaliana
AT5G47640 10.0kb downstream 10.0kb downstream 10000 false Chr5: 19310273-19320272 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122378037 5261 Brassicaceae View MSA
123835790 5264 Brassicales-Malvales View MSA
124348675 5266 SBM View MSA
124246766 5268 Malvidae View MSA
124072305 5270 Rosid View MSA
123751737 5271 Pentapetalae View MSA
122797656 5272 Eudicot View MSA
122048596 5273 Angiosperm View MSA
123429094 5275 Viridiplantae View MSA
121350139 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 127.74     High High
cufflinks 47.827     High  
cufflinks 58.622     High  
cufflinks 36.637     High  
cufflinks 40.642     High  
cufflinks 59.479     High  

0 Strain