Gene : RABA5a A. thaliana TAIR10
Primary Identifier:  ? AT5G47520 Defline:  (1 of 1) PTHR24073:SF430 - RAS-RELATED PROTEIN RABA5A
Genomic Order:  4145 Name:  ? AT5G47520
Secondary Identifier:  ? PAC:19666628
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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G47520 0.5kb upstream 0.5kb upstream 2876 true Chr5: 19277361-19280236 Arabidopsis thaliana
AT5G47520 0.5kb upstream 0.5kb upstream 500 false Chr5: 19279737-19280236 Arabidopsis thaliana
AT5G47520 0.5kb downstream 0.5kb downstream 2876 true Chr5: 19276861-19279736 Arabidopsis thaliana
AT5G47520 0.5kb downstream 0.5kb downstream 500 false Chr5: 19276861-19277360 Arabidopsis thaliana
AT5G47520 1.0kb upstream 1.0kb upstream 3376 true Chr5: 19277361-19280736 Arabidopsis thaliana
AT5G47520 1.0kb upstream 1.0kb upstream 1000 false Chr5: 19279737-19280736 Arabidopsis thaliana
AT5G47520 1.0kb downstream 1.0kb downstream 3376 true Chr5: 19276361-19279736 Arabidopsis thaliana
AT5G47520 1.0kb downstream 1.0kb downstream 1000 false Chr5: 19276361-19277360 Arabidopsis thaliana
AT5G47520 2.0kb upstream 2.0kb upstream 4376 true Chr5: 19277361-19281736 Arabidopsis thaliana
AT5G47520 2.0kb upstream 2.0kb upstream 2000 false Chr5: 19279737-19281736 Arabidopsis thaliana
AT5G47520 2.0kb downstream 2.0kb downstream 4376 true Chr5: 19275361-19279736 Arabidopsis thaliana
AT5G47520 2.0kb downstream 2.0kb downstream 2000 false Chr5: 19275361-19277360 Arabidopsis thaliana
AT5G47520 5.0kb upstream 5.0kb upstream 7376 true Chr5: 19277361-19284736 Arabidopsis thaliana
AT5G47520 5.0kb upstream 5.0kb upstream 5000 false Chr5: 19279737-19284736 Arabidopsis thaliana
AT5G47520 5.0kb downstream 5.0kb downstream 7376 true Chr5: 19272361-19279736 Arabidopsis thaliana
AT5G47520 5.0kb downstream 5.0kb downstream 5000 false Chr5: 19272361-19277360 Arabidopsis thaliana
AT5G47520 10.0kb upstream 10.0kb upstream 12376 true Chr5: 19277361-19289736 Arabidopsis thaliana
AT5G47520 10.0kb upstream 10.0kb upstream 10000 false Chr5: 19279737-19289736 Arabidopsis thaliana
AT5G47520 10.0kb downstream 10.0kb downstream 12376 true Chr5: 19267361-19279736 Arabidopsis thaliana
AT5G47520 10.0kb downstream 10.0kb downstream 10000 false Chr5: 19267361-19277360 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122376261 5261 Brassicaceae View MSA
123828031 5264 Brassicales-Malvales View MSA
124341534 5266 SBM View MSA
124246702 5268 Malvidae View MSA
124050232 5270 Rosid View MSA
123749066 5271 Pentapetalae View MSA
122786398 5272 Eudicot View MSA
122049952 5273 Angiosperm View MSA
121348745 5274 Embryophyte View MSA
123381001 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.152        
cufflinks 8.225        
cufflinks 6.03       Low
cufflinks 8.245        
cufflinks 5.903       Low
cufflinks 8.128        

0 Strain