Gene : AT5G47610 A. thaliana TAIR10
Defline:  (1 of 6) PTHR14155//PTHR14155:SF74 - RING FINGER DOMAIN-CONTAINING // RING-H2 FINGER PROTEIN ATL45-RELATED Genomic Order:  4154
Name:  ? AT5G47610 Secondary Identifier:  ? PAC:19667850
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G47610 0.5kb upstream 0.5kb upstream 1226 true Chr5: 19301188-19302413 Arabidopsis thaliana
AT5G47610 0.5kb upstream 0.5kb upstream 500 false Chr5: 19301914-19302413 Arabidopsis thaliana
AT5G47610 0.5kb downstream 0.5kb downstream 1226 true Chr5: 19300688-19301913 Arabidopsis thaliana
AT5G47610 0.5kb downstream 0.5kb downstream 500 false Chr5: 19300688-19301187 Arabidopsis thaliana
AT5G47610 1.0kb upstream 1.0kb upstream 1726 true Chr5: 19301188-19302913 Arabidopsis thaliana
AT5G47610 1.0kb upstream 1.0kb upstream 1000 false Chr5: 19301914-19302913 Arabidopsis thaliana
AT5G47610 1.0kb downstream 1.0kb downstream 1726 true Chr5: 19300188-19301913 Arabidopsis thaliana
AT5G47610 1.0kb downstream 1.0kb downstream 1000 false Chr5: 19300188-19301187 Arabidopsis thaliana
AT5G47610 2.0kb upstream 2.0kb upstream 2726 true Chr5: 19301188-19303913 Arabidopsis thaliana
AT5G47610 2.0kb upstream 2.0kb upstream 2000 false Chr5: 19301914-19303913 Arabidopsis thaliana
AT5G47610 2.0kb downstream 2.0kb downstream 2726 true Chr5: 19299188-19301913 Arabidopsis thaliana
AT5G47610 2.0kb downstream 2.0kb downstream 2000 false Chr5: 19299188-19301187 Arabidopsis thaliana
AT5G47610 5.0kb upstream 5.0kb upstream 5726 true Chr5: 19301188-19306913 Arabidopsis thaliana
AT5G47610 5.0kb upstream 5.0kb upstream 5000 false Chr5: 19301914-19306913 Arabidopsis thaliana
AT5G47610 5.0kb downstream 5.0kb downstream 5726 true Chr5: 19296188-19301913 Arabidopsis thaliana
AT5G47610 5.0kb downstream 5.0kb downstream 5000 false Chr5: 19296188-19301187 Arabidopsis thaliana
AT5G47610 10.0kb upstream 10.0kb upstream 10726 true Chr5: 19301188-19311913 Arabidopsis thaliana
AT5G47610 10.0kb upstream 10.0kb upstream 10000 false Chr5: 19301914-19311913 Arabidopsis thaliana
AT5G47610 10.0kb downstream 10.0kb downstream 10726 true Chr5: 19291188-19301913 Arabidopsis thaliana
AT5G47610 10.0kb downstream 10.0kb downstream 10000 false Chr5: 19291188-19301187 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122376128 5261 Brassicaceae View MSA
123830396 5264 Brassicales-Malvales View MSA
124349315 5266 SBM View MSA
124253083 5268 Malvidae View MSA
124073720 5270 Rosid View MSA
123747285 5271 Pentapetalae View MSA
122796390 5272 Eudicot View MSA
122051603 5273 Angiosperm View MSA
123429130 5275 Viridiplantae View MSA
121351603 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.643        
cufflinks 0.021     Low Low
cufflinks 5.586        
cufflinks 0.065     Low  
cufflinks 4.456        
cufflinks 0.0     Not Expressed Not Expressed

0 Strain