Gene : TIP2;3 A. thaliana TAIR10
Primary Identifier:  ? AT5G47450 Defline:  (1 of 3) PTHR19139//PTHR19139:SF134 - AQUAPORIN TRANSPORTER // AQUAPORIN TIP2-3-RELATED
Genomic Order:  4137 Name:  ? AT5G47450
Secondary Identifier:  ? PAC:19666257
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Expression

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3 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G47450 0.5kb upstream 0.5kb upstream 1756 true Chr5: 19248249-19250004 Arabidopsis thaliana
AT5G47450 0.5kb upstream 0.5kb upstream 500 false Chr5: 19249505-19250004 Arabidopsis thaliana
AT5G47450 0.5kb downstream 0.5kb downstream 1756 true Chr5: 19247749-19249504 Arabidopsis thaliana
AT5G47450 0.5kb downstream 0.5kb downstream 500 false Chr5: 19247749-19248248 Arabidopsis thaliana
AT5G47450 1.0kb upstream 1.0kb upstream 2256 true Chr5: 19248249-19250504 Arabidopsis thaliana
AT5G47450 1.0kb upstream 1.0kb upstream 1000 false Chr5: 19249505-19250504 Arabidopsis thaliana
AT5G47450 1.0kb downstream 1.0kb downstream 2256 true Chr5: 19247249-19249504 Arabidopsis thaliana
AT5G47450 1.0kb downstream 1.0kb downstream 1000 false Chr5: 19247249-19248248 Arabidopsis thaliana
AT5G47450 2.0kb upstream 2.0kb upstream 3256 true Chr5: 19248249-19251504 Arabidopsis thaliana
AT5G47450 2.0kb upstream 2.0kb upstream 2000 false Chr5: 19249505-19251504 Arabidopsis thaliana
AT5G47450 2.0kb downstream 2.0kb downstream 3256 true Chr5: 19246249-19249504 Arabidopsis thaliana
AT5G47450 2.0kb downstream 2.0kb downstream 2000 false Chr5: 19246249-19248248 Arabidopsis thaliana
AT5G47450 5.0kb upstream 5.0kb upstream 6256 true Chr5: 19248249-19254504 Arabidopsis thaliana
AT5G47450 5.0kb upstream 5.0kb upstream 5000 false Chr5: 19249505-19254504 Arabidopsis thaliana
AT5G47450 5.0kb downstream 5.0kb downstream 6256 true Chr5: 19243249-19249504 Arabidopsis thaliana
AT5G47450 5.0kb downstream 5.0kb downstream 5000 false Chr5: 19243249-19248248 Arabidopsis thaliana
AT5G47450 10.0kb upstream 10.0kb upstream 11256 true Chr5: 19248249-19259504 Arabidopsis thaliana
AT5G47450 10.0kb upstream 10.0kb upstream 10000 false Chr5: 19249505-19259504 Arabidopsis thaliana
AT5G47450 10.0kb downstream 10.0kb downstream 11256 true Chr5: 19238249-19249504 Arabidopsis thaliana
AT5G47450 10.0kb downstream 10.0kb downstream 10000 false Chr5: 19238249-19248248 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122375616 5261 Brassicaceae View MSA
123837775 5264 Brassicales-Malvales View MSA
124339902 5266 SBM View MSA
124253497 5268 Malvidae View MSA
124068633 5270 Rosid View MSA
123744142 5271 Pentapetalae View MSA
122790430 5272 Eudicot View MSA
122045007 5273 Angiosperm View MSA
121351438 5274 Embryophyte View MSA
123428679 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 11.07        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 15.062        
cufflinks 0.073     Low Low
cufflinks 21.49        

0 Strain