Gene : AT5G47455 A. thaliana TAIR10
Genomic Order:  4138 Name:  ? AT5G47455
Secondary Identifier:  ? PAC:19669757
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G47455 0.5kb upstream 0.5kb upstream 2273 true Chr5: 19250219-19252491 Arabidopsis thaliana
AT5G47455 0.5kb upstream 0.5kb upstream 500 false Chr5: 19250219-19250718 Arabidopsis thaliana
AT5G47455 0.5kb downstream 0.5kb downstream 2273 true Chr5: 19250719-19252991 Arabidopsis thaliana
AT5G47455 0.5kb downstream 0.5kb downstream 500 false Chr5: 19252492-19252991 Arabidopsis thaliana
AT5G47455 1.0kb upstream 1.0kb upstream 2773 true Chr5: 19249719-19252491 Arabidopsis thaliana
AT5G47455 1.0kb upstream 1.0kb upstream 1000 false Chr5: 19249719-19250718 Arabidopsis thaliana
AT5G47455 1.0kb downstream 1.0kb downstream 2773 true Chr5: 19250719-19253491 Arabidopsis thaliana
AT5G47455 1.0kb downstream 1.0kb downstream 1000 false Chr5: 19252492-19253491 Arabidopsis thaliana
AT5G47455 2.0kb upstream 2.0kb upstream 3773 true Chr5: 19248719-19252491 Arabidopsis thaliana
AT5G47455 2.0kb upstream 2.0kb upstream 2000 false Chr5: 19248719-19250718 Arabidopsis thaliana
AT5G47455 2.0kb downstream 2.0kb downstream 3773 true Chr5: 19250719-19254491 Arabidopsis thaliana
AT5G47455 2.0kb downstream 2.0kb downstream 2000 false Chr5: 19252492-19254491 Arabidopsis thaliana
AT5G47455 5.0kb upstream 5.0kb upstream 6773 true Chr5: 19245719-19252491 Arabidopsis thaliana
AT5G47455 5.0kb upstream 5.0kb upstream 5000 false Chr5: 19245719-19250718 Arabidopsis thaliana
AT5G47455 5.0kb downstream 5.0kb downstream 6773 true Chr5: 19250719-19257491 Arabidopsis thaliana
AT5G47455 5.0kb downstream 5.0kb downstream 5000 false Chr5: 19252492-19257491 Arabidopsis thaliana
AT5G47455 10.0kb upstream 10.0kb upstream 11773 true Chr5: 19240719-19252491 Arabidopsis thaliana
AT5G47455 10.0kb upstream 10.0kb upstream 10000 false Chr5: 19240719-19250718 Arabidopsis thaliana
AT5G47455 10.0kb downstream 10.0kb downstream 11773 true Chr5: 19250719-19262491 Arabidopsis thaliana
AT5G47455 10.0kb downstream 10.0kb downstream 10000 false Chr5: 19252492-19262491 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122378913 5261 Brassicaceae View MSA
123831210 5264 Brassicales-Malvales View MSA
124343684 5266 SBM View MSA
124237839 5268 Malvidae View MSA
124073761 5270 Rosid View MSA
123742798 5271 Pentapetalae View MSA
122793453 5272 Eudicot View MSA
122048539 5273 Angiosperm View MSA
121350224 5274 Embryophyte View MSA
123381631 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.608       Low
cufflinks 0.935        
cufflinks 0.631        
cufflinks 0.912        
cufflinks 0.634        
cufflinks 0.985       High

0 Strain