Gene : AT5G47420 A. thaliana TAIR10
Defline:  (1 of 2) PF01987 - Mitochondrial biogenesis AIM24 (AIM24) Genomic Order:  4133
Name:  ? AT5G47420 Secondary Identifier:  ? PAC:19668022
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G47420 0.5kb upstream 0.5kb upstream 2724 true Chr5: 19232336-19235059 Arabidopsis thaliana
AT5G47420 0.5kb upstream 0.5kb upstream 500 false Chr5: 19232336-19232835 Arabidopsis thaliana
AT5G47420 0.5kb downstream 0.5kb downstream 2724 true Chr5: 19232836-19235559 Arabidopsis thaliana
AT5G47420 0.5kb downstream 0.5kb downstream 500 false Chr5: 19235060-19235559 Arabidopsis thaliana
AT5G47420 1.0kb upstream 1.0kb upstream 3224 true Chr5: 19231836-19235059 Arabidopsis thaliana
AT5G47420 1.0kb upstream 1.0kb upstream 1000 false Chr5: 19231836-19232835 Arabidopsis thaliana
AT5G47420 1.0kb downstream 1.0kb downstream 3224 true Chr5: 19232836-19236059 Arabidopsis thaliana
AT5G47420 1.0kb downstream 1.0kb downstream 1000 false Chr5: 19235060-19236059 Arabidopsis thaliana
AT5G47420 2.0kb upstream 2.0kb upstream 4224 true Chr5: 19230836-19235059 Arabidopsis thaliana
AT5G47420 2.0kb upstream 2.0kb upstream 2000 false Chr5: 19230836-19232835 Arabidopsis thaliana
AT5G47420 2.0kb downstream 2.0kb downstream 4224 true Chr5: 19232836-19237059 Arabidopsis thaliana
AT5G47420 2.0kb downstream 2.0kb downstream 2000 false Chr5: 19235060-19237059 Arabidopsis thaliana
AT5G47420 5.0kb upstream 5.0kb upstream 7224 true Chr5: 19227836-19235059 Arabidopsis thaliana
AT5G47420 5.0kb upstream 5.0kb upstream 5000 false Chr5: 19227836-19232835 Arabidopsis thaliana
AT5G47420 5.0kb downstream 5.0kb downstream 7224 true Chr5: 19232836-19240059 Arabidopsis thaliana
AT5G47420 5.0kb downstream 5.0kb downstream 5000 false Chr5: 19235060-19240059 Arabidopsis thaliana
AT5G47420 10.0kb upstream 10.0kb upstream 12224 true Chr5: 19222836-19235059 Arabidopsis thaliana
AT5G47420 10.0kb upstream 10.0kb upstream 10000 false Chr5: 19222836-19232835 Arabidopsis thaliana
AT5G47420 10.0kb downstream 10.0kb downstream 12224 true Chr5: 19232836-19245059 Arabidopsis thaliana
AT5G47420 10.0kb downstream 10.0kb downstream 10000 false Chr5: 19235060-19245059 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122364753 5261 Brassicaceae View MSA
123830385 5264 Brassicales-Malvales View MSA
124341372 5266 SBM View MSA
124248023 5268 Malvidae View MSA
124067362 5270 Rosid View MSA
123753583 5271 Pentapetalae View MSA
122791584 5272 Eudicot View MSA
122043838 5273 Angiosperm View MSA
121310198 5274 Embryophyte View MSA
123347756 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 9.527        
cufflinks 8.921        
cufflinks 5.767       Low
cufflinks 9.496        
cufflinks 6.812        
cufflinks 9.412        

0 Strain