Gene : ERF5 A. thaliana TAIR10
Primary Identifier:  ? AT5G47230 Defline:  (1 of 3) PTHR31677//PTHR31677:SF17 - FAMILY NOT NAMED // ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 10-RELATED
Genomic Order:  4115 Name:  ? AT5G47230
Secondary Identifier:  ? PAC:19665516
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0 Pathways

Genomics

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Expression

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3 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G47230 0.5kb upstream 0.5kb upstream 1691 true Chr5: 19179439-19181129 Arabidopsis thaliana
AT5G47230 0.5kb upstream 0.5kb upstream 500 false Chr5: 19179439-19179938 Arabidopsis thaliana
AT5G47230 0.5kb downstream 0.5kb downstream 1691 true Chr5: 19179939-19181629 Arabidopsis thaliana
AT5G47230 0.5kb downstream 0.5kb downstream 500 false Chr5: 19181130-19181629 Arabidopsis thaliana
AT5G47230 1.0kb upstream 1.0kb upstream 2191 true Chr5: 19178939-19181129 Arabidopsis thaliana
AT5G47230 1.0kb upstream 1.0kb upstream 1000 false Chr5: 19178939-19179938 Arabidopsis thaliana
AT5G47230 1.0kb downstream 1.0kb downstream 2191 true Chr5: 19179939-19182129 Arabidopsis thaliana
AT5G47230 1.0kb downstream 1.0kb downstream 1000 false Chr5: 19181130-19182129 Arabidopsis thaliana
AT5G47230 2.0kb upstream 2.0kb upstream 3191 true Chr5: 19177939-19181129 Arabidopsis thaliana
AT5G47230 2.0kb upstream 2.0kb upstream 2000 false Chr5: 19177939-19179938 Arabidopsis thaliana
AT5G47230 2.0kb downstream 2.0kb downstream 3191 true Chr5: 19179939-19183129 Arabidopsis thaliana
AT5G47230 2.0kb downstream 2.0kb downstream 2000 false Chr5: 19181130-19183129 Arabidopsis thaliana
AT5G47230 5.0kb upstream 5.0kb upstream 6191 true Chr5: 19174939-19181129 Arabidopsis thaliana
AT5G47230 5.0kb upstream 5.0kb upstream 5000 false Chr5: 19174939-19179938 Arabidopsis thaliana
AT5G47230 5.0kb downstream 5.0kb downstream 6191 true Chr5: 19179939-19186129 Arabidopsis thaliana
AT5G47230 5.0kb downstream 5.0kb downstream 5000 false Chr5: 19181130-19186129 Arabidopsis thaliana
AT5G47230 10.0kb upstream 10.0kb upstream 11191 true Chr5: 19169939-19181129 Arabidopsis thaliana
AT5G47230 10.0kb upstream 10.0kb upstream 10000 false Chr5: 19169939-19179938 Arabidopsis thaliana
AT5G47230 10.0kb downstream 10.0kb downstream 11191 true Chr5: 19179939-19191129 Arabidopsis thaliana
AT5G47230 10.0kb downstream 10.0kb downstream 10000 false Chr5: 19181130-19191129 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122379781 5261 Brassicaceae View MSA
123841588 5264 Brassicales-Malvales View MSA
124350849 5266 SBM View MSA
124254184 5268 Malvidae View MSA
124063509 5270 Rosid View MSA
123746238 5271 Pentapetalae View MSA
122796887 5272 Eudicot View MSA
122050930 5273 Angiosperm View MSA
123428898 5275 Viridiplantae View MSA
121351000 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.767       Low
cufflinks 50.1     High  
cufflinks 21.526        
cufflinks 58.764     High  
cufflinks 6.735       Low
cufflinks 57.034     High  

0 Strain