Gene : GATA27 A. thaliana TAIR10
Primary Identifier:  ? AT5G47140 Defline:  (1 of 2) PTHR10071//PTHR10071:SF159 - TRANSCRIPTION FACTOR GATA GATA BINDING FACTOR // GATA TRANSCRIPTION FACTOR 26-RELATED
Genomic Order:  4104 Name:  ? AT5G47140
Secondary Identifier:  ? PAC:19670937
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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G47140 0.5kb upstream 0.5kb upstream 3355 true Chr5: 19144135-19147489 Arabidopsis thaliana
AT5G47140 0.5kb upstream 0.5kb upstream 500 false Chr5: 19144135-19144634 Arabidopsis thaliana
AT5G47140 0.5kb downstream 0.5kb downstream 3355 true Chr5: 19144635-19147989 Arabidopsis thaliana
AT5G47140 0.5kb downstream 0.5kb downstream 500 false Chr5: 19147490-19147989 Arabidopsis thaliana
AT5G47140 1.0kb upstream 1.0kb upstream 3855 true Chr5: 19143635-19147489 Arabidopsis thaliana
AT5G47140 1.0kb upstream 1.0kb upstream 1000 false Chr5: 19143635-19144634 Arabidopsis thaliana
AT5G47140 1.0kb downstream 1.0kb downstream 3855 true Chr5: 19144635-19148489 Arabidopsis thaliana
AT5G47140 1.0kb downstream 1.0kb downstream 1000 false Chr5: 19147490-19148489 Arabidopsis thaliana
AT5G47140 2.0kb upstream 2.0kb upstream 4855 true Chr5: 19142635-19147489 Arabidopsis thaliana
AT5G47140 2.0kb upstream 2.0kb upstream 2000 false Chr5: 19142635-19144634 Arabidopsis thaliana
AT5G47140 2.0kb downstream 2.0kb downstream 4855 true Chr5: 19144635-19149489 Arabidopsis thaliana
AT5G47140 2.0kb downstream 2.0kb downstream 2000 false Chr5: 19147490-19149489 Arabidopsis thaliana
AT5G47140 5.0kb upstream 5.0kb upstream 7855 true Chr5: 19139635-19147489 Arabidopsis thaliana
AT5G47140 5.0kb upstream 5.0kb upstream 5000 false Chr5: 19139635-19144634 Arabidopsis thaliana
AT5G47140 5.0kb downstream 5.0kb downstream 7855 true Chr5: 19144635-19152489 Arabidopsis thaliana
AT5G47140 5.0kb downstream 5.0kb downstream 5000 false Chr5: 19147490-19152489 Arabidopsis thaliana
AT5G47140 10.0kb upstream 10.0kb upstream 12855 true Chr5: 19134635-19147489 Arabidopsis thaliana
AT5G47140 10.0kb upstream 10.0kb upstream 10000 false Chr5: 19134635-19144634 Arabidopsis thaliana
AT5G47140 10.0kb downstream 10.0kb downstream 12855 true Chr5: 19144635-19157489 Arabidopsis thaliana
AT5G47140 10.0kb downstream 10.0kb downstream 10000 false Chr5: 19147490-19157489 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122378597 5261 Brassicaceae View MSA
123801928 5264 Brassicales-Malvales View MSA
124299175 5266 SBM View MSA
124150661 5268 Malvidae View MSA
123876239 5270 Rosid View MSA
123459939 5271 Pentapetalae View MSA
122495321 5272 Eudicot View MSA
122046202 5273 Angiosperm View MSA
121348963 5274 Embryophyte View MSA
123428177 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 12.812       High
cufflinks 8.282        
cufflinks 5.537       Low
cufflinks 9.206        
cufflinks 6.53        
cufflinks 8.19        

0 Strain