Gene : BOU A. thaliana TAIR10
Primary Identifier:  ? AT5G46800 Defline:  (1 of 1) PTHR24089:SF341 - MITOCHONDRIAL CARNITINE/ACYLCARNITINE CARRIER-LIKE PROTEIN
Genomic Order:  4063 Name:  ? AT5G46800
Secondary Identifier:  ? PAC:19669969
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G46800 0.5kb upstream 0.5kb upstream 2642 true Chr5: 18988631-18991272 Arabidopsis thaliana
AT5G46800 0.5kb upstream 0.5kb upstream 500 false Chr5: 18990773-18991272 Arabidopsis thaliana
AT5G46800 0.5kb downstream 0.5kb downstream 2642 true Chr5: 18988131-18990772 Arabidopsis thaliana
AT5G46800 0.5kb downstream 0.5kb downstream 500 false Chr5: 18988131-18988630 Arabidopsis thaliana
AT5G46800 1.0kb upstream 1.0kb upstream 3142 true Chr5: 18988631-18991772 Arabidopsis thaliana
AT5G46800 1.0kb upstream 1.0kb upstream 1000 false Chr5: 18990773-18991772 Arabidopsis thaliana
AT5G46800 1.0kb downstream 1.0kb downstream 3142 true Chr5: 18987631-18990772 Arabidopsis thaliana
AT5G46800 1.0kb downstream 1.0kb downstream 1000 false Chr5: 18987631-18988630 Arabidopsis thaliana
AT5G46800 2.0kb upstream 2.0kb upstream 4142 true Chr5: 18988631-18992772 Arabidopsis thaliana
AT5G46800 2.0kb upstream 2.0kb upstream 2000 false Chr5: 18990773-18992772 Arabidopsis thaliana
AT5G46800 2.0kb downstream 2.0kb downstream 4142 true Chr5: 18986631-18990772 Arabidopsis thaliana
AT5G46800 2.0kb downstream 2.0kb downstream 2000 false Chr5: 18986631-18988630 Arabidopsis thaliana
AT5G46800 5.0kb upstream 5.0kb upstream 7142 true Chr5: 18988631-18995772 Arabidopsis thaliana
AT5G46800 5.0kb upstream 5.0kb upstream 5000 false Chr5: 18990773-18995772 Arabidopsis thaliana
AT5G46800 5.0kb downstream 5.0kb downstream 7142 true Chr5: 18983631-18990772 Arabidopsis thaliana
AT5G46800 5.0kb downstream 5.0kb downstream 5000 false Chr5: 18983631-18988630 Arabidopsis thaliana
AT5G46800 10.0kb upstream 10.0kb upstream 12142 true Chr5: 18988631-19000772 Arabidopsis thaliana
AT5G46800 10.0kb upstream 10.0kb upstream 10000 false Chr5: 18990773-19000772 Arabidopsis thaliana
AT5G46800 10.0kb downstream 10.0kb downstream 12142 true Chr5: 18978631-18990772 Arabidopsis thaliana
AT5G46800 10.0kb downstream 10.0kb downstream 10000 false Chr5: 18978631-18988630 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122368969 5261 Brassicaceae View MSA
123835106 5264 Brassicales-Malvales View MSA
124339482 5266 SBM View MSA
124239917 5268 Malvidae View MSA
124065581 5270 Rosid View MSA
123738655 5271 Pentapetalae View MSA
122791854 5272 Eudicot View MSA
122045796 5273 Angiosperm View MSA
123429077 5275 Viridiplantae View MSA
121349185 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 33.084     High High
cufflinks 14.121        
cufflinks 31.263     High  
cufflinks 13.398       Low
cufflinks 28.004     High  
cufflinks 15.997        

0 Strain