Gene : AT5G46850 A. thaliana TAIR10
Defline:  (1 of 1) PF08320 - PIG-X / PBN1 (PIG-X) Genomic Order:  4068
Name:  ? AT5G46850 Secondary Identifier:  ? PAC:19673013
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G46850 0.5kb upstream 0.5kb upstream 1931 true Chr5: 19010108-19012038 Arabidopsis thaliana
AT5G46850 0.5kb upstream 0.5kb upstream 500 false Chr5: 19010108-19010607 Arabidopsis thaliana
AT5G46850 0.5kb downstream 0.5kb downstream 1931 true Chr5: 19010608-19012538 Arabidopsis thaliana
AT5G46850 0.5kb downstream 0.5kb downstream 500 false Chr5: 19012039-19012538 Arabidopsis thaliana
AT5G46850 1.0kb upstream 1.0kb upstream 2431 true Chr5: 19009608-19012038 Arabidopsis thaliana
AT5G46850 1.0kb upstream 1.0kb upstream 1000 false Chr5: 19009608-19010607 Arabidopsis thaliana
AT5G46850 1.0kb downstream 1.0kb downstream 2431 true Chr5: 19010608-19013038 Arabidopsis thaliana
AT5G46850 1.0kb downstream 1.0kb downstream 1000 false Chr5: 19012039-19013038 Arabidopsis thaliana
AT5G46850 2.0kb upstream 2.0kb upstream 3431 true Chr5: 19008608-19012038 Arabidopsis thaliana
AT5G46850 2.0kb upstream 2.0kb upstream 2000 false Chr5: 19008608-19010607 Arabidopsis thaliana
AT5G46850 2.0kb downstream 2.0kb downstream 3431 true Chr5: 19010608-19014038 Arabidopsis thaliana
AT5G46850 2.0kb downstream 2.0kb downstream 2000 false Chr5: 19012039-19014038 Arabidopsis thaliana
AT5G46850 5.0kb upstream 5.0kb upstream 6431 true Chr5: 19005608-19012038 Arabidopsis thaliana
AT5G46850 5.0kb upstream 5.0kb upstream 5000 false Chr5: 19005608-19010607 Arabidopsis thaliana
AT5G46850 5.0kb downstream 5.0kb downstream 6431 true Chr5: 19010608-19017038 Arabidopsis thaliana
AT5G46850 5.0kb downstream 5.0kb downstream 5000 false Chr5: 19012039-19017038 Arabidopsis thaliana
AT5G46850 10.0kb upstream 10.0kb upstream 11431 true Chr5: 19000608-19012038 Arabidopsis thaliana
AT5G46850 10.0kb upstream 10.0kb upstream 10000 false Chr5: 19000608-19010607 Arabidopsis thaliana
AT5G46850 10.0kb downstream 10.0kb downstream 11431 true Chr5: 19010608-19022038 Arabidopsis thaliana
AT5G46850 10.0kb downstream 10.0kb downstream 10000 false Chr5: 19012039-19022038 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122364429 5261 Brassicaceae View MSA
123834904 5264 Brassicales-Malvales View MSA
124345165 5266 SBM View MSA
124237032 5268 Malvidae View MSA
124068426 5270 Rosid View MSA
123736593 5271 Pentapetalae View MSA
122786629 5272 Eudicot View MSA
122050231 5273 Angiosperm View MSA
121311811 5274 Embryophyte View MSA
123349053 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.726       Low
cufflinks 2.547       High
cufflinks 1.943        
cufflinks 2.381        
cufflinks 1.795        
cufflinks 2.175        

0 Strain