Gene : AT5G46530 A. thaliana TAIR10
Defline:  (1 of 4) PF05512 - AWPM-19-like family (AWPM-19) Genomic Order:  4035
Name:  ? AT5G46530 Secondary Identifier:  ? PAC:19666656
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G46530 0.5kb upstream 0.5kb upstream 1874 true Chr5: 18875025-18876898 Arabidopsis thaliana
AT5G46530 0.5kb upstream 0.5kb upstream 500 false Chr5: 18875025-18875524 Arabidopsis thaliana
AT5G46530 0.5kb downstream 0.5kb downstream 1874 true Chr5: 18875525-18877398 Arabidopsis thaliana
AT5G46530 0.5kb downstream 0.5kb downstream 500 false Chr5: 18876899-18877398 Arabidopsis thaliana
AT5G46530 1.0kb upstream 1.0kb upstream 2374 true Chr5: 18874525-18876898 Arabidopsis thaliana
AT5G46530 1.0kb upstream 1.0kb upstream 1000 false Chr5: 18874525-18875524 Arabidopsis thaliana
AT5G46530 1.0kb downstream 1.0kb downstream 2374 true Chr5: 18875525-18877898 Arabidopsis thaliana
AT5G46530 1.0kb downstream 1.0kb downstream 1000 false Chr5: 18876899-18877898 Arabidopsis thaliana
AT5G46530 2.0kb upstream 2.0kb upstream 3374 true Chr5: 18873525-18876898 Arabidopsis thaliana
AT5G46530 2.0kb upstream 2.0kb upstream 2000 false Chr5: 18873525-18875524 Arabidopsis thaliana
AT5G46530 2.0kb downstream 2.0kb downstream 3374 true Chr5: 18875525-18878898 Arabidopsis thaliana
AT5G46530 2.0kb downstream 2.0kb downstream 2000 false Chr5: 18876899-18878898 Arabidopsis thaliana
AT5G46530 5.0kb upstream 5.0kb upstream 6374 true Chr5: 18870525-18876898 Arabidopsis thaliana
AT5G46530 5.0kb upstream 5.0kb upstream 5000 false Chr5: 18870525-18875524 Arabidopsis thaliana
AT5G46530 5.0kb downstream 5.0kb downstream 6374 true Chr5: 18875525-18881898 Arabidopsis thaliana
AT5G46530 5.0kb downstream 5.0kb downstream 5000 false Chr5: 18876899-18881898 Arabidopsis thaliana
AT5G46530 10.0kb upstream 10.0kb upstream 11374 true Chr5: 18865525-18876898 Arabidopsis thaliana
AT5G46530 10.0kb upstream 10.0kb upstream 10000 false Chr5: 18865525-18875524 Arabidopsis thaliana
AT5G46530 10.0kb downstream 10.0kb downstream 11374 true Chr5: 18875525-18886898 Arabidopsis thaliana
AT5G46530 10.0kb downstream 10.0kb downstream 10000 false Chr5: 18876899-18886898 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122378764 5261 Brassicaceae View MSA
123801983 5264 Brassicales-Malvales View MSA
124299218 5266 SBM View MSA
124252721 5268 Malvidae View MSA
124067384 5270 Rosid View MSA
123740214 5271 Pentapetalae View MSA
122788901 5272 Eudicot View MSA
122050396 5273 Angiosperm View MSA
121349282 5274 Embryophyte View MSA
123381254 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.196        
cufflinks 16.529        
cufflinks 0.793        
cufflinks 14.658        
cufflinks 0.711       Low
cufflinks 17.387        

0 Strain