Gene : WRKY8 A. thaliana TAIR10
Primary Identifier:  ? AT5G46350 Defline:  (1 of 2) PTHR31221//PTHR31221:SF19 - FAMILY NOT NAMED // WRKY TRANSCRIPTION FACTOR 28-RELATED
Genomic Order:  4017 Name:  ? AT5G46350
Secondary Identifier:  ? PAC:19667690
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G46350 0.5kb upstream 0.5kb upstream 3326 true Chr5: 18801218-18804543 Arabidopsis thaliana
AT5G46350 0.5kb upstream 0.5kb upstream 500 false Chr5: 18804044-18804543 Arabidopsis thaliana
AT5G46350 0.5kb downstream 0.5kb downstream 3326 true Chr5: 18800718-18804043 Arabidopsis thaliana
AT5G46350 0.5kb downstream 0.5kb downstream 500 false Chr5: 18800718-18801217 Arabidopsis thaliana
AT5G46350 1.0kb upstream 1.0kb upstream 3826 true Chr5: 18801218-18805043 Arabidopsis thaliana
AT5G46350 1.0kb upstream 1.0kb upstream 1000 false Chr5: 18804044-18805043 Arabidopsis thaliana
AT5G46350 1.0kb downstream 1.0kb downstream 3826 true Chr5: 18800218-18804043 Arabidopsis thaliana
AT5G46350 1.0kb downstream 1.0kb downstream 1000 false Chr5: 18800218-18801217 Arabidopsis thaliana
AT5G46350 2.0kb upstream 2.0kb upstream 4826 true Chr5: 18801218-18806043 Arabidopsis thaliana
AT5G46350 2.0kb upstream 2.0kb upstream 2000 false Chr5: 18804044-18806043 Arabidopsis thaliana
AT5G46350 2.0kb downstream 2.0kb downstream 4826 true Chr5: 18799218-18804043 Arabidopsis thaliana
AT5G46350 2.0kb downstream 2.0kb downstream 2000 false Chr5: 18799218-18801217 Arabidopsis thaliana
AT5G46350 5.0kb upstream 5.0kb upstream 7826 true Chr5: 18801218-18809043 Arabidopsis thaliana
AT5G46350 5.0kb upstream 5.0kb upstream 5000 false Chr5: 18804044-18809043 Arabidopsis thaliana
AT5G46350 5.0kb downstream 5.0kb downstream 7826 true Chr5: 18796218-18804043 Arabidopsis thaliana
AT5G46350 5.0kb downstream 5.0kb downstream 5000 false Chr5: 18796218-18801217 Arabidopsis thaliana
AT5G46350 10.0kb upstream 10.0kb upstream 12826 true Chr5: 18801218-18814043 Arabidopsis thaliana
AT5G46350 10.0kb upstream 10.0kb upstream 10000 false Chr5: 18804044-18814043 Arabidopsis thaliana
AT5G46350 10.0kb downstream 10.0kb downstream 12826 true Chr5: 18791218-18804043 Arabidopsis thaliana
AT5G46350 10.0kb downstream 10.0kb downstream 10000 false Chr5: 18791218-18801217 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122378574 5261 Brassicaceae View MSA
123801918 5264 Brassicales-Malvales View MSA
124299166 5266 SBM View MSA
124150654 5268 Malvidae View MSA
123876233 5270 Rosid View MSA
123746923 5271 Pentapetalae View MSA
122789739 5272 Eudicot View MSA
122045566 5273 Angiosperm View MSA
121351214 5274 Embryophyte View MSA
123428268 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.071       High
cufflinks 0.129     Low Low
cufflinks 1.637        
cufflinks 0.552        
cufflinks 3.191        
cufflinks 0.152     Low Low

0 Strain