Gene : CUL4 A. thaliana TAIR10
Primary Identifier:  ? AT5G46210 Defline:  (1 of 3) K10609 - cullin 4 (CUL4)
Genomic Order:  4002 Name:  ? AT5G46210
Secondary Identifier:  ? PAC:19671327
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G46210 0.5kb upstream 0.5kb upstream 5893 true Chr5: 18731418-18737310 Arabidopsis thaliana
AT5G46210 0.5kb upstream 0.5kb upstream 500 false Chr5: 18736811-18737310 Arabidopsis thaliana
AT5G46210 0.5kb downstream 0.5kb downstream 5893 true Chr5: 18730918-18736810 Arabidopsis thaliana
AT5G46210 0.5kb downstream 0.5kb downstream 500 false Chr5: 18730918-18731417 Arabidopsis thaliana
AT5G46210 1.0kb upstream 1.0kb upstream 6393 true Chr5: 18731418-18737810 Arabidopsis thaliana
AT5G46210 1.0kb upstream 1.0kb upstream 1000 false Chr5: 18736811-18737810 Arabidopsis thaliana
AT5G46210 1.0kb downstream 1.0kb downstream 6393 true Chr5: 18730418-18736810 Arabidopsis thaliana
AT5G46210 1.0kb downstream 1.0kb downstream 1000 false Chr5: 18730418-18731417 Arabidopsis thaliana
AT5G46210 2.0kb upstream 2.0kb upstream 7393 true Chr5: 18731418-18738810 Arabidopsis thaliana
AT5G46210 2.0kb upstream 2.0kb upstream 2000 false Chr5: 18736811-18738810 Arabidopsis thaliana
AT5G46210 2.0kb downstream 2.0kb downstream 7393 true Chr5: 18729418-18736810 Arabidopsis thaliana
AT5G46210 2.0kb downstream 2.0kb downstream 2000 false Chr5: 18729418-18731417 Arabidopsis thaliana
AT5G46210 5.0kb upstream 5.0kb upstream 10393 true Chr5: 18731418-18741810 Arabidopsis thaliana
AT5G46210 5.0kb upstream 5.0kb upstream 5000 false Chr5: 18736811-18741810 Arabidopsis thaliana
AT5G46210 5.0kb downstream 5.0kb downstream 10393 true Chr5: 18726418-18736810 Arabidopsis thaliana
AT5G46210 5.0kb downstream 5.0kb downstream 5000 false Chr5: 18726418-18731417 Arabidopsis thaliana
AT5G46210 10.0kb upstream 10.0kb upstream 15393 true Chr5: 18731418-18746810 Arabidopsis thaliana
AT5G46210 10.0kb upstream 10.0kb upstream 10000 false Chr5: 18736811-18746810 Arabidopsis thaliana
AT5G46210 10.0kb downstream 10.0kb downstream 15393 true Chr5: 18721418-18736810 Arabidopsis thaliana
AT5G46210 10.0kb downstream 10.0kb downstream 10000 false Chr5: 18721418-18731417 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122370322 5261 Brassicaceae View MSA
123827598 5264 Brassicales-Malvales View MSA
124346078 5266 SBM View MSA
124253104 5268 Malvidae View MSA
124065807 5270 Rosid View MSA
123747222 5271 Pentapetalae View MSA
122785909 5272 Eudicot View MSA
122047217 5273 Angiosperm View MSA
121346252 5274 Embryophyte View MSA
123427758 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 21.275        
cufflinks 22.953        
cufflinks 20.516       Low
cufflinks 24.648       High
cufflinks 21.677        
cufflinks 23.073        

0 Strain