Gene : AT5G46070 A. thaliana TAIR10
Defline:  (1 of 1) PTHR10751//PTHR10751:SF44 - GUANYLATE BINDING PROTEIN // SUBFAMILY NOT NAMED Genomic Order:  3988
Name:  ? AT5G46070 Secondary Identifier:  ? PAC:19671472
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G46070 0.5kb upstream 0.5kb upstream 5844 true Chr5: 18682864-18688707 Arabidopsis thaliana
AT5G46070 0.5kb upstream 0.5kb upstream 500 false Chr5: 18682864-18683363 Arabidopsis thaliana
AT5G46070 0.5kb downstream 0.5kb downstream 5844 true Chr5: 18683364-18689207 Arabidopsis thaliana
AT5G46070 0.5kb downstream 0.5kb downstream 500 false Chr5: 18688708-18689207 Arabidopsis thaliana
AT5G46070 1.0kb upstream 1.0kb upstream 6344 true Chr5: 18682364-18688707 Arabidopsis thaliana
AT5G46070 1.0kb upstream 1.0kb upstream 1000 false Chr5: 18682364-18683363 Arabidopsis thaliana
AT5G46070 1.0kb downstream 1.0kb downstream 6344 true Chr5: 18683364-18689707 Arabidopsis thaliana
AT5G46070 1.0kb downstream 1.0kb downstream 1000 false Chr5: 18688708-18689707 Arabidopsis thaliana
AT5G46070 2.0kb upstream 2.0kb upstream 7344 true Chr5: 18681364-18688707 Arabidopsis thaliana
AT5G46070 2.0kb upstream 2.0kb upstream 2000 false Chr5: 18681364-18683363 Arabidopsis thaliana
AT5G46070 2.0kb downstream 2.0kb downstream 7344 true Chr5: 18683364-18690707 Arabidopsis thaliana
AT5G46070 2.0kb downstream 2.0kb downstream 2000 false Chr5: 18688708-18690707 Arabidopsis thaliana
AT5G46070 5.0kb upstream 5.0kb upstream 10344 true Chr5: 18678364-18688707 Arabidopsis thaliana
AT5G46070 5.0kb upstream 5.0kb upstream 5000 false Chr5: 18678364-18683363 Arabidopsis thaliana
AT5G46070 5.0kb downstream 5.0kb downstream 10344 true Chr5: 18683364-18693707 Arabidopsis thaliana
AT5G46070 5.0kb downstream 5.0kb downstream 5000 false Chr5: 18688708-18693707 Arabidopsis thaliana
AT5G46070 10.0kb upstream 10.0kb upstream 15344 true Chr5: 18673364-18688707 Arabidopsis thaliana
AT5G46070 10.0kb upstream 10.0kb upstream 10000 false Chr5: 18673364-18683363 Arabidopsis thaliana
AT5G46070 10.0kb downstream 10.0kb downstream 15344 true Chr5: 18683364-18698707 Arabidopsis thaliana
AT5G46070 10.0kb downstream 10.0kb downstream 10000 false Chr5: 18688708-18698707 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122367934 5261 Brassicaceae View MSA
123834839 5264 Brassicales-Malvales View MSA
124338767 5266 SBM View MSA
124253371 5268 Malvidae View MSA
124050265 5270 Rosid View MSA
123747703 5271 Pentapetalae View MSA
122791372 5272 Eudicot View MSA
122041640 5273 Angiosperm View MSA
121347884 5274 Embryophyte View MSA
123426529 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 10.596        
cufflinks 16.983        
cufflinks 9.681        
cufflinks 17.622        
cufflinks 8.777       Low
cufflinks 17.865        

0 Strain