Gene : AT5G49130 A. thaliana TAIR10
Defline:  (1 of 1) PTHR11206:SF165 - MATE EFFLUX FAMILY PROTEIN Genomic Order:  4322
Name:  ? AT5G49130 Secondary Identifier:  ? PAC:19667666
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G49130 0.5kb upstream 0.5kb upstream 2154 true Chr5: 19915372-19917525 Arabidopsis thaliana
AT5G49130 0.5kb upstream 0.5kb upstream 500 false Chr5: 19915372-19915871 Arabidopsis thaliana
AT5G49130 0.5kb downstream 0.5kb downstream 2154 true Chr5: 19915872-19918025 Arabidopsis thaliana
AT5G49130 0.5kb downstream 0.5kb downstream 500 false Chr5: 19917526-19918025 Arabidopsis thaliana
AT5G49130 1.0kb upstream 1.0kb upstream 2654 true Chr5: 19914872-19917525 Arabidopsis thaliana
AT5G49130 1.0kb upstream 1.0kb upstream 1000 false Chr5: 19914872-19915871 Arabidopsis thaliana
AT5G49130 1.0kb downstream 1.0kb downstream 2654 true Chr5: 19915872-19918525 Arabidopsis thaliana
AT5G49130 1.0kb downstream 1.0kb downstream 1000 false Chr5: 19917526-19918525 Arabidopsis thaliana
AT5G49130 2.0kb upstream 2.0kb upstream 3654 true Chr5: 19913872-19917525 Arabidopsis thaliana
AT5G49130 2.0kb upstream 2.0kb upstream 2000 false Chr5: 19913872-19915871 Arabidopsis thaliana
AT5G49130 2.0kb downstream 2.0kb downstream 3654 true Chr5: 19915872-19919525 Arabidopsis thaliana
AT5G49130 2.0kb downstream 2.0kb downstream 2000 false Chr5: 19917526-19919525 Arabidopsis thaliana
AT5G49130 5.0kb upstream 5.0kb upstream 6654 true Chr5: 19910872-19917525 Arabidopsis thaliana
AT5G49130 5.0kb upstream 5.0kb upstream 5000 false Chr5: 19910872-19915871 Arabidopsis thaliana
AT5G49130 5.0kb downstream 5.0kb downstream 6654 true Chr5: 19915872-19922525 Arabidopsis thaliana
AT5G49130 5.0kb downstream 5.0kb downstream 5000 false Chr5: 19917526-19922525 Arabidopsis thaliana
AT5G49130 10.0kb upstream 10.0kb upstream 11654 true Chr5: 19905872-19917525 Arabidopsis thaliana
AT5G49130 10.0kb upstream 10.0kb upstream 10000 false Chr5: 19905872-19915871 Arabidopsis thaliana
AT5G49130 10.0kb downstream 10.0kb downstream 11654 true Chr5: 19915872-19927525 Arabidopsis thaliana
AT5G49130 10.0kb downstream 10.0kb downstream 10000 false Chr5: 19917526-19927525 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122369303 5261 Brassicaceae View MSA
123829419 5264 Brassicales-Malvales View MSA
124342624 5266 SBM View MSA
124253972 5268 Malvidae View MSA
124062367 5270 Rosid View MSA
123750437 5271 Pentapetalae View MSA
122790105 5272 Eudicot View MSA
122045079 5273 Angiosperm View MSA
121345520 5274 Embryophyte View MSA
123428088 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.105     Low  
cufflinks 0.018     Low Low
cufflinks 0.158     Low  
cufflinks 0.102     Low  
cufflinks 0.144     Low  
cufflinks 0.056     Low  

0 Strain