Gene : SLD5 A. thaliana TAIR10
Primary Identifier:  ? AT5G49010 Defline:  (1 of 1) K10735 - GINS complex subunit 4 (GINS4, SLD5)
Genomic Order:  4311 Name:  ? AT5G49010
Secondary Identifier:  ? PAC:19667125
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G49010 0.5kb upstream 0.5kb upstream 2635 true Chr5: 19865731-19868365 Arabidopsis thaliana
AT5G49010 0.5kb upstream 0.5kb upstream 500 false Chr5: 19865731-19866230 Arabidopsis thaliana
AT5G49010 0.5kb downstream 0.5kb downstream 2635 true Chr5: 19866231-19868865 Arabidopsis thaliana
AT5G49010 0.5kb downstream 0.5kb downstream 500 false Chr5: 19868366-19868865 Arabidopsis thaliana
AT5G49010 1.0kb upstream 1.0kb upstream 3135 true Chr5: 19865231-19868365 Arabidopsis thaliana
AT5G49010 1.0kb upstream 1.0kb upstream 1000 false Chr5: 19865231-19866230 Arabidopsis thaliana
AT5G49010 1.0kb downstream 1.0kb downstream 3135 true Chr5: 19866231-19869365 Arabidopsis thaliana
AT5G49010 1.0kb downstream 1.0kb downstream 1000 false Chr5: 19868366-19869365 Arabidopsis thaliana
AT5G49010 2.0kb upstream 2.0kb upstream 4135 true Chr5: 19864231-19868365 Arabidopsis thaliana
AT5G49010 2.0kb upstream 2.0kb upstream 2000 false Chr5: 19864231-19866230 Arabidopsis thaliana
AT5G49010 2.0kb downstream 2.0kb downstream 4135 true Chr5: 19866231-19870365 Arabidopsis thaliana
AT5G49010 2.0kb downstream 2.0kb downstream 2000 false Chr5: 19868366-19870365 Arabidopsis thaliana
AT5G49010 5.0kb upstream 5.0kb upstream 7135 true Chr5: 19861231-19868365 Arabidopsis thaliana
AT5G49010 5.0kb upstream 5.0kb upstream 5000 false Chr5: 19861231-19866230 Arabidopsis thaliana
AT5G49010 5.0kb downstream 5.0kb downstream 7135 true Chr5: 19866231-19873365 Arabidopsis thaliana
AT5G49010 5.0kb downstream 5.0kb downstream 5000 false Chr5: 19868366-19873365 Arabidopsis thaliana
AT5G49010 10.0kb upstream 10.0kb upstream 12135 true Chr5: 19856231-19868365 Arabidopsis thaliana
AT5G49010 10.0kb upstream 10.0kb upstream 10000 false Chr5: 19856231-19866230 Arabidopsis thaliana
AT5G49010 10.0kb downstream 10.0kb downstream 12135 true Chr5: 19866231-19878365 Arabidopsis thaliana
AT5G49010 10.0kb downstream 10.0kb downstream 10000 false Chr5: 19868366-19878365 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122373131 5261 Brassicaceae View MSA
123837689 5264 Brassicales-Malvales View MSA
124342914 5266 SBM View MSA
124241639 5268 Malvidae View MSA
124063241 5270 Rosid View MSA
123739150 5271 Pentapetalae View MSA
122785984 5272 Eudicot View MSA
122043096 5273 Angiosperm View MSA
121344568 5274 Embryophyte View MSA
123424652 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.862        
cufflinks 1.188        
cufflinks 0.685       Low
cufflinks 1.26        
cufflinks 0.636       Low
cufflinks 1.262        

0 Strain