Gene : AT5G48740 A. thaliana TAIR10
Defline:  (1 of 1) PF03109//PF11721//PF13855 - ABC1 family (ABC1) // Di-glucose binding within endoplasmic reticulum (Malectin) // Leucine rich repeat (LRR_8) Genomic Order:  4281
Name:  ? AT5G48740 Secondary Identifier:  ? PAC:19667930
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G48740 0.5kb upstream 0.5kb upstream 4675 true Chr5: 19765195-19769869 Arabidopsis thaliana
AT5G48740 0.5kb upstream 0.5kb upstream 500 false Chr5: 19769370-19769869 Arabidopsis thaliana
AT5G48740 0.5kb downstream 0.5kb downstream 4675 true Chr5: 19764695-19769369 Arabidopsis thaliana
AT5G48740 0.5kb downstream 0.5kb downstream 500 false Chr5: 19764695-19765194 Arabidopsis thaliana
AT5G48740 1.0kb upstream 1.0kb upstream 5175 true Chr5: 19765195-19770369 Arabidopsis thaliana
AT5G48740 1.0kb upstream 1.0kb upstream 1000 false Chr5: 19769370-19770369 Arabidopsis thaliana
AT5G48740 1.0kb downstream 1.0kb downstream 5175 true Chr5: 19764195-19769369 Arabidopsis thaliana
AT5G48740 1.0kb downstream 1.0kb downstream 1000 false Chr5: 19764195-19765194 Arabidopsis thaliana
AT5G48740 2.0kb upstream 2.0kb upstream 6175 true Chr5: 19765195-19771369 Arabidopsis thaliana
AT5G48740 2.0kb upstream 2.0kb upstream 2000 false Chr5: 19769370-19771369 Arabidopsis thaliana
AT5G48740 2.0kb downstream 2.0kb downstream 6175 true Chr5: 19763195-19769369 Arabidopsis thaliana
AT5G48740 2.0kb downstream 2.0kb downstream 2000 false Chr5: 19763195-19765194 Arabidopsis thaliana
AT5G48740 5.0kb upstream 5.0kb upstream 9175 true Chr5: 19765195-19774369 Arabidopsis thaliana
AT5G48740 5.0kb upstream 5.0kb upstream 5000 false Chr5: 19769370-19774369 Arabidopsis thaliana
AT5G48740 5.0kb downstream 5.0kb downstream 9175 true Chr5: 19760195-19769369 Arabidopsis thaliana
AT5G48740 5.0kb downstream 5.0kb downstream 5000 false Chr5: 19760195-19765194 Arabidopsis thaliana
AT5G48740 10.0kb upstream 10.0kb upstream 14175 true Chr5: 19765195-19779369 Arabidopsis thaliana
AT5G48740 10.0kb upstream 10.0kb upstream 10000 false Chr5: 19769370-19779369 Arabidopsis thaliana
AT5G48740 10.0kb downstream 10.0kb downstream 14175 true Chr5: 19755195-19769369 Arabidopsis thaliana
AT5G48740 10.0kb downstream 10.0kb downstream 10000 false Chr5: 19755195-19765194 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122361061 5261 Brassicaceae View MSA
123831753 5264 Brassicales-Malvales View MSA
124340199 5266 SBM View MSA
124240791 5268 Malvidae View MSA
124066664 5270 Rosid View MSA
123753765 5271 Pentapetalae View MSA
122797900 5272 Eudicot View MSA
122051692 5273 Angiosperm View MSA
123429169 5275 Viridiplantae View MSA
121351748 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.455        
cufflinks 2.627        
cufflinks 0.27       Low
cufflinks 3.153        
cufflinks 0.249       Low
cufflinks 4.446       High

0 Strain