Gene : AT5G48760 A. thaliana TAIR10
Defline:  (1 of 4) K02872 - large subunit ribosomal protein L13Ae (RP-L13Ae, RPL13A) Genomic Order:  4283
Name:  ? AT5G48760 Secondary Identifier:  ? PAC:19667744
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G48760 0.5kb upstream 0.5kb upstream 2101 true Chr5: 19771138-19773238 Arabidopsis thaliana
AT5G48760 0.5kb upstream 0.5kb upstream 500 false Chr5: 19772739-19773238 Arabidopsis thaliana
AT5G48760 0.5kb downstream 0.5kb downstream 2101 true Chr5: 19770638-19772738 Arabidopsis thaliana
AT5G48760 0.5kb downstream 0.5kb downstream 500 false Chr5: 19770638-19771137 Arabidopsis thaliana
AT5G48760 1.0kb upstream 1.0kb upstream 2601 true Chr5: 19771138-19773738 Arabidopsis thaliana
AT5G48760 1.0kb upstream 1.0kb upstream 1000 false Chr5: 19772739-19773738 Arabidopsis thaliana
AT5G48760 1.0kb downstream 1.0kb downstream 2601 true Chr5: 19770138-19772738 Arabidopsis thaliana
AT5G48760 1.0kb downstream 1.0kb downstream 1000 false Chr5: 19770138-19771137 Arabidopsis thaliana
AT5G48760 2.0kb upstream 2.0kb upstream 3601 true Chr5: 19771138-19774738 Arabidopsis thaliana
AT5G48760 2.0kb upstream 2.0kb upstream 2000 false Chr5: 19772739-19774738 Arabidopsis thaliana
AT5G48760 2.0kb downstream 2.0kb downstream 3601 true Chr5: 19769138-19772738 Arabidopsis thaliana
AT5G48760 2.0kb downstream 2.0kb downstream 2000 false Chr5: 19769138-19771137 Arabidopsis thaliana
AT5G48760 5.0kb upstream 5.0kb upstream 6601 true Chr5: 19771138-19777738 Arabidopsis thaliana
AT5G48760 5.0kb upstream 5.0kb upstream 5000 false Chr5: 19772739-19777738 Arabidopsis thaliana
AT5G48760 5.0kb downstream 5.0kb downstream 6601 true Chr5: 19766138-19772738 Arabidopsis thaliana
AT5G48760 5.0kb downstream 5.0kb downstream 5000 false Chr5: 19766138-19771137 Arabidopsis thaliana
AT5G48760 10.0kb upstream 10.0kb upstream 11601 true Chr5: 19771138-19782738 Arabidopsis thaliana
AT5G48760 10.0kb upstream 10.0kb upstream 10000 false Chr5: 19772739-19782738 Arabidopsis thaliana
AT5G48760 10.0kb downstream 10.0kb downstream 11601 true Chr5: 19761138-19772738 Arabidopsis thaliana
AT5G48760 10.0kb downstream 10.0kb downstream 10000 false Chr5: 19761138-19771137 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122379928 5261 Brassicaceae View MSA
123830713 5264 Brassicales-Malvales View MSA
124348862 5266 SBM View MSA
124247090 5268 Malvidae View MSA
124069577 5270 Rosid View MSA
123745483 5271 Pentapetalae View MSA
122796740 5272 Eudicot View MSA
122042126 5273 Angiosperm View MSA
121343862 5274 Embryophyte View MSA
123428218 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 13.455        
cufflinks 20.199        
cufflinks 11.463       Low
cufflinks 20.478        
cufflinks 11.129       Low
cufflinks 23.057       High

0 Strain