Gene : AT5G48570 A. thaliana TAIR10
Defline:  (1 of 1) PTHR10516//PTHR10516:SF279 - PEPTIDYL-PROLYL CIS-TRANS ISOMERASE // PEPTIDYL-PROLYL CIS-TRANS ISOMERASE FKBP65 Genomic Order:  4259
Name:  ? AT5G48570 Secondary Identifier:  ? PAC:19670395
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Expression

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3 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G48570 0.5kb upstream 0.5kb upstream 3804 true Chr5: 19690542-19694345 Arabidopsis thaliana
AT5G48570 0.5kb upstream 0.5kb upstream 500 false Chr5: 19693846-19694345 Arabidopsis thaliana
AT5G48570 0.5kb downstream 0.5kb downstream 3804 true Chr5: 19690042-19693845 Arabidopsis thaliana
AT5G48570 0.5kb downstream 0.5kb downstream 500 false Chr5: 19690042-19690541 Arabidopsis thaliana
AT5G48570 1.0kb upstream 1.0kb upstream 4304 true Chr5: 19690542-19694845 Arabidopsis thaliana
AT5G48570 1.0kb upstream 1.0kb upstream 1000 false Chr5: 19693846-19694845 Arabidopsis thaliana
AT5G48570 1.0kb downstream 1.0kb downstream 4304 true Chr5: 19689542-19693845 Arabidopsis thaliana
AT5G48570 1.0kb downstream 1.0kb downstream 1000 false Chr5: 19689542-19690541 Arabidopsis thaliana
AT5G48570 2.0kb upstream 2.0kb upstream 5304 true Chr5: 19690542-19695845 Arabidopsis thaliana
AT5G48570 2.0kb upstream 2.0kb upstream 2000 false Chr5: 19693846-19695845 Arabidopsis thaliana
AT5G48570 2.0kb downstream 2.0kb downstream 5304 true Chr5: 19688542-19693845 Arabidopsis thaliana
AT5G48570 2.0kb downstream 2.0kb downstream 2000 false Chr5: 19688542-19690541 Arabidopsis thaliana
AT5G48570 5.0kb upstream 5.0kb upstream 8304 true Chr5: 19690542-19698845 Arabidopsis thaliana
AT5G48570 5.0kb upstream 5.0kb upstream 5000 false Chr5: 19693846-19698845 Arabidopsis thaliana
AT5G48570 5.0kb downstream 5.0kb downstream 8304 true Chr5: 19685542-19693845 Arabidopsis thaliana
AT5G48570 5.0kb downstream 5.0kb downstream 5000 false Chr5: 19685542-19690541 Arabidopsis thaliana
AT5G48570 10.0kb upstream 10.0kb upstream 13304 true Chr5: 19690542-19703845 Arabidopsis thaliana
AT5G48570 10.0kb upstream 10.0kb upstream 10000 false Chr5: 19693846-19703845 Arabidopsis thaliana
AT5G48570 10.0kb downstream 10.0kb downstream 13304 true Chr5: 19680542-19693845 Arabidopsis thaliana
AT5G48570 10.0kb downstream 10.0kb downstream 10000 false Chr5: 19680542-19690541 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122365604 5261 Brassicaceae View MSA
123798993 5264 Brassicales-Malvales View MSA
124296562 5266 SBM View MSA
124243874 5268 Malvidae View MSA
124067136 5270 Rosid View MSA
123746363 5271 Pentapetalae View MSA
122792796 5272 Eudicot View MSA
122047440 5273 Angiosperm View MSA
121347490 5274 Embryophyte View MSA
123426312 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.451        
cufflinks 5.916        
cufflinks 1.314       Low
cufflinks 5.933        
cufflinks 1.465       Low
cufflinks 6.116        

0 Strain