Gene : ATGLR1.2 A. thaliana TAIR10
Primary Identifier:  ? AT5G48400 Defline:  (1 of 7) PTHR18966//PTHR18966:SF204 - IONOTROPIC GLUTAMATE RECEPTOR // GLUTAMATE RECEPTOR 2.5-RELATED
Genomic Order:  4238 Name:  ? AT5G48400
Secondary Identifier:  ? PAC:19666097
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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G48400 0.5kb upstream 0.5kb upstream 3503 true Chr5: 19615744-19619246 Arabidopsis thaliana
AT5G48400 0.5kb upstream 0.5kb upstream 500 false Chr5: 19615744-19616243 Arabidopsis thaliana
AT5G48400 0.5kb downstream 0.5kb downstream 3503 true Chr5: 19616244-19619746 Arabidopsis thaliana
AT5G48400 0.5kb downstream 0.5kb downstream 500 false Chr5: 19619247-19619746 Arabidopsis thaliana
AT5G48400 1.0kb upstream 1.0kb upstream 4003 true Chr5: 19615244-19619246 Arabidopsis thaliana
AT5G48400 1.0kb upstream 1.0kb upstream 1000 false Chr5: 19615244-19616243 Arabidopsis thaliana
AT5G48400 1.0kb downstream 1.0kb downstream 4003 true Chr5: 19616244-19620246 Arabidopsis thaliana
AT5G48400 1.0kb downstream 1.0kb downstream 1000 false Chr5: 19619247-19620246 Arabidopsis thaliana
AT5G48400 2.0kb upstream 2.0kb upstream 5003 true Chr5: 19614244-19619246 Arabidopsis thaliana
AT5G48400 2.0kb upstream 2.0kb upstream 2000 false Chr5: 19614244-19616243 Arabidopsis thaliana
AT5G48400 2.0kb downstream 2.0kb downstream 5003 true Chr5: 19616244-19621246 Arabidopsis thaliana
AT5G48400 2.0kb downstream 2.0kb downstream 2000 false Chr5: 19619247-19621246 Arabidopsis thaliana
AT5G48400 5.0kb upstream 5.0kb upstream 8003 true Chr5: 19611244-19619246 Arabidopsis thaliana
AT5G48400 5.0kb upstream 5.0kb upstream 5000 false Chr5: 19611244-19616243 Arabidopsis thaliana
AT5G48400 5.0kb downstream 5.0kb downstream 8003 true Chr5: 19616244-19624246 Arabidopsis thaliana
AT5G48400 5.0kb downstream 5.0kb downstream 5000 false Chr5: 19619247-19624246 Arabidopsis thaliana
AT5G48400 10.0kb upstream 10.0kb upstream 13003 true Chr5: 19606244-19619246 Arabidopsis thaliana
AT5G48400 10.0kb upstream 10.0kb upstream 10000 false Chr5: 19606244-19616243 Arabidopsis thaliana
AT5G48400 10.0kb downstream 10.0kb downstream 13003 true Chr5: 19616244-19629246 Arabidopsis thaliana
AT5G48400 10.0kb downstream 10.0kb downstream 10000 false Chr5: 19619247-19629246 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122379929 5261 Brassicaceae View MSA
123827743 5264 Brassicales-Malvales View MSA
124347411 5266 SBM View MSA
124255377 5268 Malvidae View MSA
124039054 5270 Rosid View MSA
123753015 5271 Pentapetalae View MSA
122797408 5272 Eudicot View MSA
122051662 5273 Angiosperm View MSA
121351346 5274 Embryophyte View MSA
123428796 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.321        
cufflinks 0.35        
cufflinks 0.825        
cufflinks 1.021        
cufflinks 2.481       High
cufflinks 0.16     Low Low

0 Strain