Gene : AT5G48290 A. thaliana TAIR10
Defline:  (1 of 2) PTHR22814:SF106 - HEAVY-METAL-ASSOCIATED DOMAIN-CONTAINING PROTEIN Genomic Order:  4224
Name:  ? AT5G48290 Secondary Identifier:  ? PAC:19668202
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G48290 0.5kb upstream 0.5kb upstream 1404 true Chr5: 19568396-19569799 Arabidopsis thaliana
AT5G48290 0.5kb upstream 0.5kb upstream 500 false Chr5: 19568396-19568895 Arabidopsis thaliana
AT5G48290 0.5kb downstream 0.5kb downstream 1404 true Chr5: 19568896-19570299 Arabidopsis thaliana
AT5G48290 0.5kb downstream 0.5kb downstream 500 false Chr5: 19569800-19570299 Arabidopsis thaliana
AT5G48290 1.0kb upstream 1.0kb upstream 1904 true Chr5: 19567896-19569799 Arabidopsis thaliana
AT5G48290 1.0kb upstream 1.0kb upstream 1000 false Chr5: 19567896-19568895 Arabidopsis thaliana
AT5G48290 1.0kb downstream 1.0kb downstream 1904 true Chr5: 19568896-19570799 Arabidopsis thaliana
AT5G48290 1.0kb downstream 1.0kb downstream 1000 false Chr5: 19569800-19570799 Arabidopsis thaliana
AT5G48290 2.0kb upstream 2.0kb upstream 2904 true Chr5: 19566896-19569799 Arabidopsis thaliana
AT5G48290 2.0kb upstream 2.0kb upstream 2000 false Chr5: 19566896-19568895 Arabidopsis thaliana
AT5G48290 2.0kb downstream 2.0kb downstream 2904 true Chr5: 19568896-19571799 Arabidopsis thaliana
AT5G48290 2.0kb downstream 2.0kb downstream 2000 false Chr5: 19569800-19571799 Arabidopsis thaliana
AT5G48290 5.0kb upstream 5.0kb upstream 5904 true Chr5: 19563896-19569799 Arabidopsis thaliana
AT5G48290 5.0kb upstream 5.0kb upstream 5000 false Chr5: 19563896-19568895 Arabidopsis thaliana
AT5G48290 5.0kb downstream 5.0kb downstream 5904 true Chr5: 19568896-19574799 Arabidopsis thaliana
AT5G48290 5.0kb downstream 5.0kb downstream 5000 false Chr5: 19569800-19574799 Arabidopsis thaliana
AT5G48290 10.0kb upstream 10.0kb upstream 10904 true Chr5: 19558896-19569799 Arabidopsis thaliana
AT5G48290 10.0kb upstream 10.0kb upstream 10000 false Chr5: 19558896-19568895 Arabidopsis thaliana
AT5G48290 10.0kb downstream 10.0kb downstream 10904 true Chr5: 19568896-19579799 Arabidopsis thaliana
AT5G48290 10.0kb downstream 10.0kb downstream 10000 false Chr5: 19569800-19579799 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122373738 5261 Brassicaceae View MSA
123800608 5264 Brassicales-Malvales View MSA
124298004 5266 SBM View MSA
124149753 5268 Malvidae View MSA
124072357 5270 Rosid View MSA
123753587 5271 Pentapetalae View MSA
122796697 5272 Eudicot View MSA
122051560 5273 Angiosperm View MSA
121351529 5274 Embryophyte View MSA
123424750 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.449        
cufflinks 2.538        
cufflinks 0.141     Low Low
cufflinks 2.939        
cufflinks 0.298        
cufflinks 1.566        

0 Strain