Gene : OBE2 A. thaliana TAIR10
Primary Identifier:  ? AT5G48160 Defline:  (1 of 2) PTHR21736:SF20 - PROTEIN OBERON 1-RELATED
Genomic Order:  4210 Name:  ? AT5G48160
Secondary Identifier:  ? PAC:19666611
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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G48160 0.5kb upstream 0.5kb upstream 2984 true Chr5: 19527833-19530816 Arabidopsis thaliana
AT5G48160 0.5kb upstream 0.5kb upstream 500 false Chr5: 19530317-19530816 Arabidopsis thaliana
AT5G48160 0.5kb downstream 0.5kb downstream 2984 true Chr5: 19527333-19530316 Arabidopsis thaliana
AT5G48160 0.5kb downstream 0.5kb downstream 500 false Chr5: 19527333-19527832 Arabidopsis thaliana
AT5G48160 1.0kb upstream 1.0kb upstream 3484 true Chr5: 19527833-19531316 Arabidopsis thaliana
AT5G48160 1.0kb upstream 1.0kb upstream 1000 false Chr5: 19530317-19531316 Arabidopsis thaliana
AT5G48160 1.0kb downstream 1.0kb downstream 3484 true Chr5: 19526833-19530316 Arabidopsis thaliana
AT5G48160 1.0kb downstream 1.0kb downstream 1000 false Chr5: 19526833-19527832 Arabidopsis thaliana
AT5G48160 2.0kb upstream 2.0kb upstream 4484 true Chr5: 19527833-19532316 Arabidopsis thaliana
AT5G48160 2.0kb upstream 2.0kb upstream 2000 false Chr5: 19530317-19532316 Arabidopsis thaliana
AT5G48160 2.0kb downstream 2.0kb downstream 4484 true Chr5: 19525833-19530316 Arabidopsis thaliana
AT5G48160 2.0kb downstream 2.0kb downstream 2000 false Chr5: 19525833-19527832 Arabidopsis thaliana
AT5G48160 5.0kb upstream 5.0kb upstream 7484 true Chr5: 19527833-19535316 Arabidopsis thaliana
AT5G48160 5.0kb upstream 5.0kb upstream 5000 false Chr5: 19530317-19535316 Arabidopsis thaliana
AT5G48160 5.0kb downstream 5.0kb downstream 7484 true Chr5: 19522833-19530316 Arabidopsis thaliana
AT5G48160 5.0kb downstream 5.0kb downstream 5000 false Chr5: 19522833-19527832 Arabidopsis thaliana
AT5G48160 10.0kb upstream 10.0kb upstream 12484 true Chr5: 19527833-19540316 Arabidopsis thaliana
AT5G48160 10.0kb upstream 10.0kb upstream 10000 false Chr5: 19530317-19540316 Arabidopsis thaliana
AT5G48160 10.0kb downstream 10.0kb downstream 12484 true Chr5: 19517833-19530316 Arabidopsis thaliana
AT5G48160 10.0kb downstream 10.0kb downstream 10000 false Chr5: 19517833-19527832 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122361718 5261 Brassicaceae View MSA
123837666 5264 Brassicales-Malvales View MSA
124337418 5266 SBM View MSA
124242275 5268 Malvidae View MSA
124068106 5270 Rosid View MSA
123747254 5271 Pentapetalae View MSA
122789487 5272 Eudicot View MSA
122041658 5273 Angiosperm View MSA
121346503 5274 Embryophyte View MSA
123380393 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 22.685        
cufflinks 24.001        
cufflinks 21.665        
cufflinks 26.749        
cufflinks 28.553     High High
cufflinks 17.884       Low

0 Strain