Gene : AT5G48190 A. thaliana TAIR10
Defline:  (1 of 6) PTHR21461:SF12 - F21O3.9 PROTEIN-RELATED Genomic Order:  4214
Name:  ? AT5G48190 Secondary Identifier:  ? PAC:19669389
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G48190 0.5kb upstream 0.5kb upstream 1191 true Chr5: 19542979-19544169 Arabidopsis thaliana
AT5G48190 0.5kb upstream 0.5kb upstream 500 false Chr5: 19542979-19543478 Arabidopsis thaliana
AT5G48190 0.5kb downstream 0.5kb downstream 1191 true Chr5: 19543479-19544669 Arabidopsis thaliana
AT5G48190 0.5kb downstream 0.5kb downstream 500 false Chr5: 19544170-19544669 Arabidopsis thaliana
AT5G48190 1.0kb upstream 1.0kb upstream 1691 true Chr5: 19542479-19544169 Arabidopsis thaliana
AT5G48190 1.0kb upstream 1.0kb upstream 1000 false Chr5: 19542479-19543478 Arabidopsis thaliana
AT5G48190 1.0kb downstream 1.0kb downstream 1691 true Chr5: 19543479-19545169 Arabidopsis thaliana
AT5G48190 1.0kb downstream 1.0kb downstream 1000 false Chr5: 19544170-19545169 Arabidopsis thaliana
AT5G48190 2.0kb upstream 2.0kb upstream 2691 true Chr5: 19541479-19544169 Arabidopsis thaliana
AT5G48190 2.0kb upstream 2.0kb upstream 2000 false Chr5: 19541479-19543478 Arabidopsis thaliana
AT5G48190 2.0kb downstream 2.0kb downstream 2691 true Chr5: 19543479-19546169 Arabidopsis thaliana
AT5G48190 2.0kb downstream 2.0kb downstream 2000 false Chr5: 19544170-19546169 Arabidopsis thaliana
AT5G48190 5.0kb upstream 5.0kb upstream 5691 true Chr5: 19538479-19544169 Arabidopsis thaliana
AT5G48190 5.0kb upstream 5.0kb upstream 5000 false Chr5: 19538479-19543478 Arabidopsis thaliana
AT5G48190 5.0kb downstream 5.0kb downstream 5691 true Chr5: 19543479-19549169 Arabidopsis thaliana
AT5G48190 5.0kb downstream 5.0kb downstream 5000 false Chr5: 19544170-19549169 Arabidopsis thaliana
AT5G48190 10.0kb upstream 10.0kb upstream 10691 true Chr5: 19533479-19544169 Arabidopsis thaliana
AT5G48190 10.0kb upstream 10.0kb upstream 10000 false Chr5: 19533479-19543478 Arabidopsis thaliana
AT5G48190 10.0kb downstream 10.0kb downstream 10691 true Chr5: 19543479-19554169 Arabidopsis thaliana
AT5G48190 10.0kb downstream 10.0kb downstream 10000 false Chr5: 19544170-19554169 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121495554 5273 Angiosperm View MSA
122331666 5261 Brassicaceae View MSA
123772821 5264 Brassicales-Malvales View MSA
124271328 5266 SBM View MSA
124127325 5268 Malvidae View MSA
123856183 5270 Rosid View MSA
123442125 5271 Pentapetalae View MSA
122477703 5272 Eudicot View MSA
120768918 5274 Embryophyte View MSA
122811300 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.415        
cufflinks 0.042     Low Low
cufflinks 0.925        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.656        

0 Strain