Gene : GFA2 A. thaliana TAIR10
Primary Identifier:  ? AT5G48030 Defline:  (1 of 1) PTHR24078//PTHR24078:SF283 - DNAJ HOMOLOG SUBFAMILY C MEMBER // GAMETOPHYTIC FACTOR 2
Genomic Order:  4198 Name:  ? AT5G48030
Secondary Identifier:  ? PAC:19669587
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G48030 0.5kb upstream 0.5kb upstream 4392 true Chr5: 19466011-19470402 Arabidopsis thaliana
AT5G48030 0.5kb upstream 0.5kb upstream 500 false Chr5: 19469903-19470402 Arabidopsis thaliana
AT5G48030 0.5kb downstream 0.5kb downstream 4392 true Chr5: 19465511-19469902 Arabidopsis thaliana
AT5G48030 0.5kb downstream 0.5kb downstream 500 false Chr5: 19465511-19466010 Arabidopsis thaliana
AT5G48030 1.0kb upstream 1.0kb upstream 4892 true Chr5: 19466011-19470902 Arabidopsis thaliana
AT5G48030 1.0kb upstream 1.0kb upstream 1000 false Chr5: 19469903-19470902 Arabidopsis thaliana
AT5G48030 1.0kb downstream 1.0kb downstream 4892 true Chr5: 19465011-19469902 Arabidopsis thaliana
AT5G48030 1.0kb downstream 1.0kb downstream 1000 false Chr5: 19465011-19466010 Arabidopsis thaliana
AT5G48030 2.0kb upstream 2.0kb upstream 5892 true Chr5: 19466011-19471902 Arabidopsis thaliana
AT5G48030 2.0kb upstream 2.0kb upstream 2000 false Chr5: 19469903-19471902 Arabidopsis thaliana
AT5G48030 2.0kb downstream 2.0kb downstream 5892 true Chr5: 19464011-19469902 Arabidopsis thaliana
AT5G48030 2.0kb downstream 2.0kb downstream 2000 false Chr5: 19464011-19466010 Arabidopsis thaliana
AT5G48030 5.0kb upstream 5.0kb upstream 8892 true Chr5: 19466011-19474902 Arabidopsis thaliana
AT5G48030 5.0kb upstream 5.0kb upstream 5000 false Chr5: 19469903-19474902 Arabidopsis thaliana
AT5G48030 5.0kb downstream 5.0kb downstream 8892 true Chr5: 19461011-19469902 Arabidopsis thaliana
AT5G48030 5.0kb downstream 5.0kb downstream 5000 false Chr5: 19461011-19466010 Arabidopsis thaliana
AT5G48030 10.0kb upstream 10.0kb upstream 13892 true Chr5: 19466011-19479902 Arabidopsis thaliana
AT5G48030 10.0kb upstream 10.0kb upstream 10000 false Chr5: 19469903-19479902 Arabidopsis thaliana
AT5G48030 10.0kb downstream 10.0kb downstream 13892 true Chr5: 19456011-19469902 Arabidopsis thaliana
AT5G48030 10.0kb downstream 10.0kb downstream 10000 false Chr5: 19456011-19466010 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122377406 5261 Brassicaceae View MSA
123830442 5264 Brassicales-Malvales View MSA
124345640 5266 SBM View MSA
124243735 5268 Malvidae View MSA
124068999 5270 Rosid View MSA
123738793 5271 Pentapetalae View MSA
122792867 5272 Eudicot View MSA
122041939 5273 Angiosperm View MSA
121345452 5274 Embryophyte View MSA
123380218 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 12.81       High
cufflinks 8.857        
cufflinks 9.406        
cufflinks 9.242        
cufflinks 8.513        
cufflinks 8.593        

0 Strain