Gene : THAS1 A. thaliana TAIR10
Primary Identifier:  ? AT5G48010 Defline:  (1 of 1) 5.4.99.31 - Thalianol synthase
Genomic Order:  4196 Name:  ? AT5G48010
Secondary Identifier:  ? PAC:19669912
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1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Athaliana PWY-5992 Arabidopsis thaliana pathologic  

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G48010 0.5kb upstream 0.5kb upstream 5230 true Chr5: 19456460-19461689 Arabidopsis thaliana
AT5G48010 0.5kb upstream 0.5kb upstream 500 false Chr5: 19456460-19456959 Arabidopsis thaliana
AT5G48010 0.5kb downstream 0.5kb downstream 5230 true Chr5: 19456960-19462189 Arabidopsis thaliana
AT5G48010 0.5kb downstream 0.5kb downstream 500 false Chr5: 19461690-19462189 Arabidopsis thaliana
AT5G48010 1.0kb upstream 1.0kb upstream 5730 true Chr5: 19455960-19461689 Arabidopsis thaliana
AT5G48010 1.0kb upstream 1.0kb upstream 1000 false Chr5: 19455960-19456959 Arabidopsis thaliana
AT5G48010 1.0kb downstream 1.0kb downstream 5730 true Chr5: 19456960-19462689 Arabidopsis thaliana
AT5G48010 1.0kb downstream 1.0kb downstream 1000 false Chr5: 19461690-19462689 Arabidopsis thaliana
AT5G48010 2.0kb upstream 2.0kb upstream 6730 true Chr5: 19454960-19461689 Arabidopsis thaliana
AT5G48010 2.0kb upstream 2.0kb upstream 2000 false Chr5: 19454960-19456959 Arabidopsis thaliana
AT5G48010 2.0kb downstream 2.0kb downstream 6730 true Chr5: 19456960-19463689 Arabidopsis thaliana
AT5G48010 2.0kb downstream 2.0kb downstream 2000 false Chr5: 19461690-19463689 Arabidopsis thaliana
AT5G48010 5.0kb upstream 5.0kb upstream 9730 true Chr5: 19451960-19461689 Arabidopsis thaliana
AT5G48010 5.0kb upstream 5.0kb upstream 5000 false Chr5: 19451960-19456959 Arabidopsis thaliana
AT5G48010 5.0kb downstream 5.0kb downstream 9730 true Chr5: 19456960-19466689 Arabidopsis thaliana
AT5G48010 5.0kb downstream 5.0kb downstream 5000 false Chr5: 19461690-19466689 Arabidopsis thaliana
AT5G48010 10.0kb upstream 10.0kb upstream 14730 true Chr5: 19446960-19461689 Arabidopsis thaliana
AT5G48010 10.0kb upstream 10.0kb upstream 10000 false Chr5: 19446960-19456959 Arabidopsis thaliana
AT5G48010 10.0kb downstream 10.0kb downstream 14730 true Chr5: 19456960-19471689 Arabidopsis thaliana
AT5G48010 10.0kb downstream 10.0kb downstream 10000 false Chr5: 19461690-19471689 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121495728 5273 Angiosperm View MSA
122331937 5261 Brassicaceae View MSA
123773060 5264 Brassicales-Malvales View MSA
124271563 5266 SBM View MSA
124127536 5268 Malvidae View MSA
123856377 5270 Rosid View MSA
123442308 5271 Pentapetalae View MSA
122477886 5272 Eudicot View MSA
120769090 5274 Embryophyte View MSA
122811468 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.011     Low  
cufflinks 1.138        
cufflinks 0.002     Low Low
cufflinks 4.826       High
cufflinks 0.007     Low  
cufflinks 6.079       High

0 Strain