Gene : RABA4C A. thaliana TAIR10
Primary Identifier:  ? AT5G47960 Defline:  (1 of 16) K07904 - Ras-related protein Rab-11A (RAB11A)
Genomic Order:  4191 Name:  ? AT5G47960
Secondary Identifier:  ? PAC:19670796
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Expression

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3 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G47960 0.5kb upstream 0.5kb upstream 1650 true Chr5: 19421384-19423033 Arabidopsis thaliana
AT5G47960 0.5kb upstream 0.5kb upstream 500 false Chr5: 19422534-19423033 Arabidopsis thaliana
AT5G47960 0.5kb downstream 0.5kb downstream 1650 true Chr5: 19420884-19422533 Arabidopsis thaliana
AT5G47960 0.5kb downstream 0.5kb downstream 500 false Chr5: 19420884-19421383 Arabidopsis thaliana
AT5G47960 1.0kb upstream 1.0kb upstream 2150 true Chr5: 19421384-19423533 Arabidopsis thaliana
AT5G47960 1.0kb upstream 1.0kb upstream 1000 false Chr5: 19422534-19423533 Arabidopsis thaliana
AT5G47960 1.0kb downstream 1.0kb downstream 2150 true Chr5: 19420384-19422533 Arabidopsis thaliana
AT5G47960 1.0kb downstream 1.0kb downstream 1000 false Chr5: 19420384-19421383 Arabidopsis thaliana
AT5G47960 2.0kb upstream 2.0kb upstream 3150 true Chr5: 19421384-19424533 Arabidopsis thaliana
AT5G47960 2.0kb upstream 2.0kb upstream 2000 false Chr5: 19422534-19424533 Arabidopsis thaliana
AT5G47960 2.0kb downstream 2.0kb downstream 3150 true Chr5: 19419384-19422533 Arabidopsis thaliana
AT5G47960 2.0kb downstream 2.0kb downstream 2000 false Chr5: 19419384-19421383 Arabidopsis thaliana
AT5G47960 5.0kb upstream 5.0kb upstream 6150 true Chr5: 19421384-19427533 Arabidopsis thaliana
AT5G47960 5.0kb upstream 5.0kb upstream 5000 false Chr5: 19422534-19427533 Arabidopsis thaliana
AT5G47960 5.0kb downstream 5.0kb downstream 6150 true Chr5: 19416384-19422533 Arabidopsis thaliana
AT5G47960 5.0kb downstream 5.0kb downstream 5000 false Chr5: 19416384-19421383 Arabidopsis thaliana
AT5G47960 10.0kb upstream 10.0kb upstream 11150 true Chr5: 19421384-19432533 Arabidopsis thaliana
AT5G47960 10.0kb upstream 10.0kb upstream 10000 false Chr5: 19422534-19432533 Arabidopsis thaliana
AT5G47960 10.0kb downstream 10.0kb downstream 11150 true Chr5: 19411384-19422533 Arabidopsis thaliana
AT5G47960 10.0kb downstream 10.0kb downstream 10000 false Chr5: 19411384-19421383 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122363667 5261 Brassicaceae View MSA
123832609 5264 Brassicales-Malvales View MSA
124321814 5266 SBM View MSA
124246319 5268 Malvidae View MSA
124065082 5270 Rosid View MSA
123746606 5271 Pentapetalae View MSA
122786113 5272 Eudicot View MSA
122041554 5273 Angiosperm View MSA
121351595 5274 Embryophyte View MSA
123426852 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.792        
cufflinks 15.61        
cufflinks 2.593        
cufflinks 18.411       High
cufflinks 2.07       Low
cufflinks 14.392        

0 Strain