Gene : AT5G47870 A. thaliana TAIR10
Genomic Order:  4181 Name:  ? AT5G47870
Secondary Identifier:  ? PAC:19665575
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G47870 0.5kb upstream 0.5kb upstream 2002 true Chr5: 19384368-19386369 Arabidopsis thaliana
AT5G47870 0.5kb upstream 0.5kb upstream 500 false Chr5: 19385870-19386369 Arabidopsis thaliana
AT5G47870 0.5kb downstream 0.5kb downstream 2002 true Chr5: 19383868-19385869 Arabidopsis thaliana
AT5G47870 0.5kb downstream 0.5kb downstream 500 false Chr5: 19383868-19384367 Arabidopsis thaliana
AT5G47870 1.0kb upstream 1.0kb upstream 2502 true Chr5: 19384368-19386869 Arabidopsis thaliana
AT5G47870 1.0kb upstream 1.0kb upstream 1000 false Chr5: 19385870-19386869 Arabidopsis thaliana
AT5G47870 1.0kb downstream 1.0kb downstream 2502 true Chr5: 19383368-19385869 Arabidopsis thaliana
AT5G47870 1.0kb downstream 1.0kb downstream 1000 false Chr5: 19383368-19384367 Arabidopsis thaliana
AT5G47870 2.0kb upstream 2.0kb upstream 3502 true Chr5: 19384368-19387869 Arabidopsis thaliana
AT5G47870 2.0kb upstream 2.0kb upstream 2000 false Chr5: 19385870-19387869 Arabidopsis thaliana
AT5G47870 2.0kb downstream 2.0kb downstream 3502 true Chr5: 19382368-19385869 Arabidopsis thaliana
AT5G47870 2.0kb downstream 2.0kb downstream 2000 false Chr5: 19382368-19384367 Arabidopsis thaliana
AT5G47870 5.0kb upstream 5.0kb upstream 6502 true Chr5: 19384368-19390869 Arabidopsis thaliana
AT5G47870 5.0kb upstream 5.0kb upstream 5000 false Chr5: 19385870-19390869 Arabidopsis thaliana
AT5G47870 5.0kb downstream 5.0kb downstream 6502 true Chr5: 19379368-19385869 Arabidopsis thaliana
AT5G47870 5.0kb downstream 5.0kb downstream 5000 false Chr5: 19379368-19384367 Arabidopsis thaliana
AT5G47870 10.0kb upstream 10.0kb upstream 11502 true Chr5: 19384368-19395869 Arabidopsis thaliana
AT5G47870 10.0kb upstream 10.0kb upstream 10000 false Chr5: 19385870-19395869 Arabidopsis thaliana
AT5G47870 10.0kb downstream 10.0kb downstream 11502 true Chr5: 19374368-19385869 Arabidopsis thaliana
AT5G47870 10.0kb downstream 10.0kb downstream 10000 false Chr5: 19374368-19384367 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122361108 5261 Brassicaceae View MSA
123836542 5264 Brassicales-Malvales View MSA
124345169 5266 SBM View MSA
124242339 5268 Malvidae View MSA
124064303 5270 Rosid View MSA
123745540 5271 Pentapetalae View MSA
122794464 5272 Eudicot View MSA
122043827 5273 Angiosperm View MSA
121348522 5274 Embryophyte View MSA
123380896 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 12.449        
cufflinks 14.025        
cufflinks 11.866       Low
cufflinks 16.932       High
cufflinks 12.613        
cufflinks 16.346       High

0 Strain